Pogonomyrmex barbatus (red harvester ant): 105430185
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Entry
105430185 CDS
T04903
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03013
Nucleocytoplasmic transport
pbar03015
mRNA surveillance pathway
pbar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105430185
09122 Translation
03013 Nucleocytoplasmic transport
105430185
03015 mRNA surveillance pathway
105430185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbar03019
]
105430185
03041 Spliceosome [BR:
pbar03041
]
105430185
03009 Ribosome biogenesis [BR:
pbar03009
]
105430185
03012 Translation factors [BR:
pbar03012
]
105430185
Enzymes [BR:
pbar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105430185
Messenger RNA biogenesis [BR:
pbar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105430185
mRNA cycle factors
Stress granule specific factors
105430185
Spliceosome [BR:
pbar03041
]
Complex C
Other components
EJC/TREX
105430185
Ribosome biogenesis [BR:
pbar03009
]
Eukaryotic type
90S particles
Helicases
105430185
Translation factors [BR:
pbar03012
]
Eukaryotic type
Initiation factors
eIF-4
105430185
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
UvrD-helicase
AAA_30
TniB
Utp25_C
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-GeneID:
105430185
NCBI-ProteinID:
XP_011641895
UniProt:
A0A6I9WGL6
LinkDB
All DBs
Position
Unknown
AA seq
431 aa
AA seq
DB search
MYLTSCDSITTPHRTDTSVSHNCVQRFIEMAEKSRRVAQTEDLSNVEFETSEDVEVIPTF
DNMGLRDELLRGIYAYGFEKPSAIQQRSIKPIMKGRDVIAQAQSGTGKTATFSIAILQSL
DTQVRETQVLVLSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVV
SGTPGRVFDMIKRRVLRTRAIKMLVLDESDEMLNKGFKEQIYDVYRYLPPATQVVLVSAT
LPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQA
VIFCNTKRKVDWLTEKMREANFTVCSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWARG
IDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVSINFVKTDDIRILRDIEQYYSTQI
DEMPMNVADLI
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtacctaacttcatgcgatagcattacgacgccgcacaggacagacacgagtgtttct
cataattgtgtccaacgtttcatcgaaatggcggagaaatcacgtcgagtggcgcaaaca
gaagatttatcaaatgtcgagtttgaaaccagcgaggatgtcgaagttattcccaccttc
gacaatatgggccttcgcgatgagctattacgcgggatttacgcgtatggttttgaaaaa
ccatccgccattcaacaacgatccattaaacctatcatgaagggtagagatgtgatagct
caggcgcaatctggtacaggaaaaactgctactttctcaattgcgatattacagtcacta
gatactcaagtacgagaaactcaggttctagttctctcacctactcgggaacttgcaact
caaattcagaaagttatacttgcactgggagattttatgaatgtacaatgccatgcttgc
attggtggcacaaatcttggggaagatatcaggaaacttgattatggacagcatgttgta
tctggaacacctggcagagtatttgatatgattaaaaggagggtactcagaactagagct
atcaaaatgttggtactagatgaatctgacgaaatgttgaacaaaggctttaaggaacaa
atttatgatgtgtatcgatatcttccaccagcgacacaagttgttttagtttcggccact
ttaccacatgaaattcttgagatgactagtaaatttatgacagatcccattcgtattctt
gtcaaacgtgatgaactgacgttggaaggaatcaagcagttctttgttgctgtagaacga
gaagaatggaaattcgacacattatgtgatttgtatgatacattaacgataacacaagct
gttatcttttgtaatactaaacgtaaagtagactggttaacggaaaaaatgcgagaggct
aactttacagtatgttctatgcatggggatatgccacagaaggaacgagacaacataatg
aaagaatttcgatctggtcagagtcgggtattgattacaacggatgtttgggcgagagga
atcgatgttcagcaggtatcgctcgtaattaactatgatctgcctaacaatcgtgaatta
tatattcacagaataggtcgatcgggacgtttcggtcgtaaaggtgtatcaataaacttt
gtaaaaactgatgatataagaattctccgagatatcgagcaatattattctacacaaata
gacgaaatgccgatgaatgtggcagatttgatataa
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