Pogonomyrmex barbatus (red harvester ant): 105430253
Help
Entry
105430253 CDS
T04903
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03022
Basal transcription factors
pbar03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105430253
09124 Replication and repair
03420 Nucleotide excision repair
105430253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbar03021
]
105430253
03400 DNA repair and recombination proteins [BR:
pbar03400
]
105430253
Transcription machinery [BR:
pbar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105430253
DNA repair and recombination proteins [BR:
pbar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105430253
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-UDP
zf-RING_UBOX
zf-C3HC4
zf-P11
zf-RING_2
zf-C3HC4_2
zf-RING_4
TRAF3_RING
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
105430253
NCBI-ProteinID:
XP_011642025
UniProt:
A0A6I9WH69
LinkDB
All DBs
Position
Unknown
AA seq
323 aa
AA seq
DB search
MDDQACPRCKTTKYRNPSLKMMVNVCGHALCESCVDLLFLKGSGSCPECKIPLRRTNFRV
QMFEDSMVEKEVNIRKRILRDFNKKEEDFSTLREYNDYLEEIETIIYNLANNIDVMETNK
KIEQYKKDNKEQIAKSKSKLGKSEYELEEIIELEKQKEEERRIELAKEEVEIKRRKIREK
EALIDELTFSDANAKNIVESFASAVQTQKKEAKATLPSTVKVTQFSTGIKFGNQGNQNYL
SVPKIEEGPLYSYTPIWQEIEGPSPPNWRELQARGYVSHIRNECQVERAGGFRAHIACLR
ALQEAMAGLYHNPSQRQVEFATV
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggacgatcaagcgtgtccacgatgcaagaccaccaaatatcgaaatccatcattaaaa
atgatggtgaacgtttgtggccatgcgttatgcgagagctgtgtagacttgctctttctg
aaaggttctgggtcttgtccagaatgcaaaattccattaagaagaacaaactttcgagtt
caaatgtttgaagattctatggttgaaaaagaagtgaatataaggaaacgtattcttcga
gattttaataaaaaggaagaagacttttctacattaagggaatataatgattatttagaa
gaaattgagactataatatataacttggcaaataacattgatgtaatggaaaccaacaaa
aaaatagaacaatataaaaaagacaacaaagaacaaatagcaaaaagtaagtcaaaactt
ggtaaaagtgaatatgaattagaagaaataatagaattagaaaagcagaaggaagaagaa
agaaggatagaacttgcaaaagaagaggtcgagataaaaagaagaaagattcgtgagaaa
gaagctctgattgatgagctaactttctccgatgcaaatgccaaaaatattgttgaatct
tttgcttctgcggtacagacacagaaaaaggaagcaaaagctaccttaccttccaccgtt
aaggtaacccagttcagtacaggaattaaattcggtaatcagggaaatcaaaactatcta
tcagtgccaaagatagaggaggggcctctctattcttacacgcccatttggcaagaaata
gaaggcccatcacctcctaactggcgagagcttcaagctcgtggatatgtttcacatata
cgtaacgaatgtcaagttgaaagagcgggtggatttagggcgcatatcgcgtgtctacga
gcgttgcaggaagctatggctggcttatatcacaatccatcgcaacgacaagtggaattc
gcgactgtatga
DBGET
integrated database retrieval system
