Pogonomyrmex barbatus (red harvester ant): 105430394
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Entry
105430394 CDS
T04903
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105430394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbar03021
]
105430394
Transcription machinery [BR:
pbar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
105430394
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
105430394
NCBI-ProteinID:
XP_011642240
UniProt:
A0A6I9WHC8
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MNSNTGSKPAVAPSVQEFSIRVPKNSKKKHNVMRFNATLNVDFSKWTQVKMERENNMKEY
KGVEEEMPKFGAGSEFGRDAREEARRKKYGITSRKYKPEDQPWILKSGGKTGKKFKGIRE
GGVSENAAYYVFTHAADGAIEAFPLHEWYNFQPIQRYKALSAEEAEQEFSRRNKVMNYFS
LMLRKRLRNDEDGGDEEELVEGGKGKKSGKKEKELKISEMDEWMDSDDDESDSDEEETKK
GSEDEDDGKKKKKTKVQLQKKKKKKNVSDDEAFEESDDGDEEGRECDYISDSSDSESDKE
IKSVAEEDALRKLLASDEDEDDEEQADKKDGEEDKDEDEEGKEKDDKDKDKLGKEADKRK
DKKKKKKAKKKDQKKSASGKDSSSDFSSDSESDSDTTLKEKDNKKPNSAHSSRSATPTPA
ASASDSLKRKQSGSPDLSQAKKLKLDNFNLVPVTPYIPGANESGITEDAVRRYLMRKPMT
TTELLQKFKSKKTGLTSEQLVNIMTQILKKINPTKQTIKNKMYLSIKAQSN
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgaatacaggttcaaagcctgctgttgcaccatctgtgcaggaatttagtatt
agagtaccaaaaaatagcaaaaagaaacacaatgttatgagattcaacgcaacattgaat
gtagatttttcaaaatggactcaagtaaagatggaacgagaaaacaatatgaaagaatat
aagggtgtggaagaggaaatgccgaaatttggtgctggatctgaatttggacgtgatgcc
agggaagaagccaggagaaagaagtatggtattactagtcggaaatataaaccagaagat
caaccatggattctgaaatctggaggtaaaactggaaagaaatttaaaggcatacgagag
ggaggagttagtgaaaacgcagcgtattatgtctttactcatgctgccgatggtgcaata
gaagcttttcctttacatgaatggtataactttcagccaatacagagatataaagctctt
agtgctgaagaagctgagcaagagttcagtcgtagaaacaaggtaatgaattatttctca
ctcatgttacgcaaaagattgagaaatgatgaggatggtggagacgaggaggagttggta
gaaggtggtaaaggcaaaaagtcaggcaagaaggaaaaggaattgaaaatatccgaaatg
gatgaatggatggatagtgacgatgatgaatcagatagtgatgaagaagaaactaagaaa
ggatctgaagatgaggatgatggaaagaagaaaaaaaagacaaaagttcaattacaaaag
aagaaaaagaagaagaatgtatcagacgatgaagcatttgaggaaagtgacgatggtgat
gaggagggaagagaatgtgattatatttctgattcctctgattctgaatccgataaggaa
atcaaatctgtcgcagaagaagatgcgttgagaaagttactcgcatccgatgaagatgaa
gatgatgaggaacaagcagataagaaggatggcgaagaagataaagatgaagacgaggaa
ggaaaggaaaaggatgataaagacaaagacaagcttggtaaggaagcagacaagaggaaa
gataaaaagaagaaaaagaaagccaagaagaaagaccagaaaaaatcagcatcaggaaag
gattcctccagcgatttttcaagcgattcggaatcagattcagatacaacgctaaaagag
aaagataataaaaaacctaatagcgcacacagttcgagatcagcgacaccaacacctgca
gctagtgcctcggattctctcaagagaaagcaatctggatctccggatttgtcgcaagcg
aaaaaattaaaactcgataacttcaatttagttccagtaacaccgtatataccgggagcg
aacgaatcgggaattacggaggatgcagtgaggcggtatttgatgcgcaagcctatgaca
acgaccgaattattacagaaattcaaatccaagaagactggcctcacgtccgaacaactt
gtcaacattatgactcagatactgaaaaagataaatccaacgaagcaaactatcaagaat
aaaatgtatttatcgatcaaagcgcaatccaactga
DBGET
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