Pogonomyrmex barbatus (red harvester ant): 105430742
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Entry
105430742 CDS
T04903
Name
(RefSeq) LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pbar03036
]
105430742
Enzymes [BR:
pbar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
105430742
Chromosome and associated proteins [BR:
pbar03036
]
Eukaryotic type
Gene silencing
piRNA pathway
105430742
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
TUDOR
Helicase_C
cREC_REC
WD40_alt
Beta_propel
Motif
Other DBs
NCBI-GeneID:
105430742
NCBI-ProteinID:
XP_011642732
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MPIPIEKSTVTTATDNKKNCESFQLQKTSKPCARQALDAIPITAKAIKIKNVQNPCIMRV
YEIENHTETLRKIEKKLLNFMQTDDFLKKKYNENDVKIDDMVFVYNDTQSSNETEFELPS
FVWRGLVKSKRKDGTYCIFLVDHGTCIELTKDKFCIVPQDFISDKYLTKTVGIYGMLPIC
IRRKGAISKGSNAMAIILEKWTEEAIQFTKHLLSASESVHFDHLITDKNGREYELLKYIE
TSTQFDEKRENVLHVRCSRNKRHESNMLHINGIDHHETKFSLSEKIVVQSTIDCGVLNDL
RDLRYPRGIHQSWNECINSMRPRKLQSYIWPAINKGLNVVAIGSSQCGKTTGCVMAVCGQ
IATHQNEIHSATHPLALILCASSTEVIYIQSLCESFLRKFNNLKSVGAFNGKSDRSIAAM
IYNGCQILVTTPRYLVRFLNKNKGLLSFDKLSCLLLDNADIILDKYFKSLGELFKIHKII
ENRDPQSNDRPILQIIMSATECTIEMKKFVSVVMHNPYICIGSFVEAIVFKSIRPKLSRL
ISTDKNKKILELLEDIYITSRTAIVCINAEEAEELNSFLLSTKKTLLIHEKMKSFDIRGK
RESWMACVRGFYPILICTDLILADLNLTNIQWLIHHSVCLKFKNQFNYRFSLLLDNLMQD
VTNCKVHIIVDENNNVQFPYIVKLLQRTGVVVNPDKLNYTEVS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgccgattcctattgaaaaatcaaccgtaacaacagcaacggacaataaaaaaaactgt
gaatcttttcaactacaaaagacaagtaagccttgtgctcgccaagctttagatgctatt
cctattactgccaaagcaataaaaataaaaaatgtacaaaatccatgtatcatgagagtt
tacgaaattgaaaatcatactgagacacttcgtaaaatagaaaaaaaattattaaatttt
atgcaaacagacgattttctgaaaaaaaaatataacgagaatgatgtcaaaattgacgat
atggtttttgtgtataatgatacacaaagtagtaatgagactgaatttgaattaccatcc
tttgtttggcgaggtttagtaaagagtaagagaaaggatggaacatattgtattttttta
gtggatcatggcacgtgcattgaattaaccaaagataaattttgtatagttccacaagat
tttatttctgacaaatatctaacgaaaactgttggtatatatggtatgttgccgatttgt
atcagaagaaaaggcgcaatttcgaaaggttctaacgctatggcaattattttagaaaaa
tggaccgaagaggcaattcagtttacaaaacatctcctcagtgcatctgaaagtgttcac
tttgatcatttaatcacagacaaaaatggaagagaatatgaattattaaaatatattgaa
acctctactcaatttgacgaaaaacgagagaacgttttacatgtacgttgttcaaggaat
aaaagacatgaaagcaacatgctacatattaatggaattgatcatcatgaaacaaaattt
tctctcagtgaaaagattgtagtacaaagcacaatagactgtggtgttttaaatgatctt
agagaccttagatatccgagaggaatacatcagagttggaatgaatgcattaactccatg
aggcctagaaaacttcagtcttatatatggccagctataaataaagggttaaatgttgtt
gccatcggatcatcacaatgtggtaaaacaactggatgtgtaatggctgtttgtggacaa
atagctacacatcaaaatgaaatacatagtgcaactcatccattggcactgattttatgt
gcttcatctactgaagtaatttatattcaatcattgtgtgagtcattccttcgaaaattt
aataatttaaaatctgttggagcatttaatggcaagtcggatagatctatagcggcaatg
atatataatggctgtcaaatcttggtgaccacaccgcgatatctagttcgatttttgaat
aaaaataaaggtctattatcattcgacaaactttcttgtttactacttgacaatgctgat
ataattttagataaatatttcaagtcgctaggggaattgtttaaaatacataagataatc
gaaaaccgtgacccgcaaagcaacgacaggccgatattgcagataattatgtcggcaaca
gaatgtacgattgagatgaaaaaatttgtatctgtagtgatgcataatccatacatatgc
attgggtcatttgtagaagctattgtttttaaatctatacgtccaaaacttagtcgttta
atatctacagacaagaataaaaaaatattagagttactagaggatatttatatcacatcg
agaacagcaatagtttgtataaatgccgaagaagccgaagagttaaattcgtttttactt
tcaacaaagaaaactctgctaattcatgaaaagatgaaatcatttgatatacgaggcaaa
cgagaaagttggatggcatgtgtacgaggtttttatccaatattaatatgtactgattta
attttagctgatcttaatcttactaatattcaatggctcatacatcactctgtgtgttta
aaattcaaaaaccaattcaattatagattttctctactcttagataatttaatgcaggat
gttactaactgtaaagttcatataattgttgatgaaaataacaatgtgcaatttccatac
atagtaaaactattgcagcgaacaggagttgtagtaaatcctgataagctaaactacact
gaggtaagctaa
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