KEGG   Pogonomyrmex barbatus (red harvester ant): 105430797
Entry
105430797         CDS       T04903                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
pbar  Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:pbar00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pbar04812]
    105430797
Cytoskeleton proteins [BR:pbar04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     105430797
SSDB
Motif
Pfam: WD40 Katanin_con80 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_EIPR1 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_RIG_2nd WD40_RFWD3 eIF2A Beta-prop_Vps41 PROPPIN Beta-prop_IP5PC_F Beta-prop_LRRK2 WD_LRWD1 PEP5_VPS11_N Beta-prop_WDR35_TULP_N RMC1_N WDR54 Beta-prop_NOL10_N Ge1_WD40
Other DBs
NCBI-GeneID: 105430797
NCBI-ProteinID: XP_011642814
UniProt: A0A6I9WJ85
LinkDB
Position
Unknown
AA seq 875 aa
MASSTRRSWKLQEFVAHTPNVNCLALGHKSGRVLVTGGDDKKVNLWAVGKQNCIMSLSGH
TTPIECVRFGQTEDLVCAGSQTGALKIWDLEHAKLARTLTGHKSGIRCMDFHPYGELLAS
GSLDTAIKLWDIRRKGCIFTYKGHNRTVNSLKFSPDGQWIASAGEEGMVKLWDLKAGRQL
REFSEHRGSATTVEFHPHEFLLASGSTDKTVHFWDLESFQLVSSTEQSHSSAIRCLYFSQ
GGECLFAGSHDVLKVYGWEPGRTLDTIPTGWGKVQDIAVAQNQLIGASLHTANVVLYVCD
LKKIAPLGGISAVSSPFSHGNSLRKSFSRERPIGLKKHTLDVRTIEEADKSGTDPEDEAT
YADIPNVTEYRDIFQPNRALSRTPPLEPPEAFQEPHDIDPAQPQILQNLSTSMANLSTIE
REEVPPMPSPSSPCPPAPTLSVTKPVPVRVQPIKSSPPIQRNTITSTSQIRANLQANNGL
NQRTSKNFASIPPLRQNITPFPGKKVANNEQTVSTPPQPLGPQRSNSTLTPRVAPMAAVI
PVMDDGKLKNRVPSPDSPKHYLKRQSSRDGEQGYESDYPVQINNIRHSPSDPALNRPNTA
QSRSTSLNRNFATSTTLSARNASTTTSTTRKLPNKAQIPPNPKIDMRVSQIRTNVEDTEK
EELVPMSADKPYGLDVENFLPHSYTGPTALGYPQMGVLAEMSEAEVLNNMMRSHDSMMAV
LKSRHRSLQIIYSLWHNKDLKAAVESAVAMNDLAVIVDLLGILTLKPAMWNLDLCNFLLG
PISDLFQSKYEMYITVACSALRLILRNFAPVIKSNVEAPLHTIGVDVSREERYHKCLSCY
EKLSAIRAILLKKQSTSGKLGASFRELAVLIRSLE
NT seq 2628 nt   +upstreamnt  +downstreamnt
atggcctcgtcaacgaggagatcctggaagctccaggaatttgttgcccatacaccaaac
gtcaattgcttggcgttaggccacaagtcgggtcgtgtcctagtcacaggtggtgatgat
aagaaagtgaatctatgggccgttggaaagcagaattgtattatgagcctgagtggccat
accactcctatagaatgtgtacgctttggccaaacagaagatcttgtatgcgctggctca
cagacgggcgcattgaaaatttgggatctggaacatgctaaactggcacgtacattgacg
ggacacaaatctggaatacgttgcatggacttccatccttatggggagctattggcgtct
gggagtttggacacagcaattaaattatgggatatccgcaggaagggttgcatttttaca
tacaagggtcacaacaggactgtgaatagcttaaagtttagtcctgatggacagtggatc
gcgagcgctggagaggaagggatggttaagctgtgggatctaaaggctggtagacaacta
agggaattttcagaacatagagggtcggccacaaccgtcgagtttcatccgcatgaattc
ctattagctagcggcagtaccgacaaaacagttcacttctgggacttagagtcctttcaa
ctcgtatcttccacggaacaaagtcattcttcagccatccgatgcttatactttagtcaa
ggcggagaatgcctgtttgccggtagccatgatgttttaaaagtttacggctgggagccg
ggtagaactctggacacgataccgactggctggggaaaagttcaggacatagccgtagct
caaaatcaattgatcggcgcgagtcttcacaccgccaatgttgttttgtacgtttgcgac
ttgaaaaagatcgcaccactcgggggaatatccgccgtgagttctccattcagtcatgga
aattctctgaggaagagtttctccagggaacgaccgatcggattgaagaagcatacatta
gatgtacggacgatagaagaggcggacaaatctggcacggatccagaggatgaagccacc
tatgcggatatacccaacgtaaccgagtacagggacatttttcaaccgaatagggcgttg
tctcgcacaccacctctcgaacctcccgaggctttccaggagcctcatgatatagatcca
gcgcaaccgcagattctgcaaaatctctctacctcaatggcgaacctgagcacgatagaa
cgcgaagaggtgccaccgatgccatctccctcttcgccatgtccaccggcgcccacgtta
tccgtaacgaagccggtaccagtgcgcgttcagcctattaaatcctcaccgccgatacaa
aggaacactattacgtctaccagtcaaatcagggcgaatctgcaggcgaataacggtcta
aatcaacggacatccaagaactttgcatctataccgccgttgcggcagaacattacgccg
tttccgggaaagaaggtagccaataatgaacaaacagtgtcgacgccgccccaaccttta
ggaccgcaaaggtcgaactctaccctaacaccacgcgtcgcaccgatggccgcggtgatc
cctgtgatggatgatggaaagttgaaaaatagagtacccagcccagattctccaaaacac
tacctgaagaggcagagcagcagggacggggagcagggatacgaaagcgactatcctgta
caaattaataatataagacatagtccctcggatcctgcgctgaacaggccaaatacggcg
cagtcgaggtcgacgtcgctcaatcgaaattttgctacctcaactacgctatcggcacgt
aatgcctctacaactacgtcgaccacaaggaaactgcctaataaggcgcagatcccaccg
aatcccaagatcgacatgcgtgtctcacaaataagaactaacgtcgaagatacggaaaaa
gaggaattggtgccgatgagcgccgataaaccttacggcttagacgtggaaaatttctta
ccgcacagttacaccggtcccacggcattgggttatcctcagatgggcgtgctggcggaa
atgtcggaagccgaagtgttgaacaatatgatgcgcagccacgattcgatgatggcagta
cttaagagtcgacatcgctcgttacagataatttattctctctggcacaataaggacctc
aaggccgcggtagaatctgcagtcgcgatgaatgacttggcagttatcgtggaccttttg
ggtatcctcacattaaaaccagcgatgtggaatctggacctatgcaatttcttactgggt
cccatcagcgatctctttcagagtaaatatgaaatgtatataactgtagcatgttcggca
ttgagacttattcttcgtaattttgccccagtgataaagtctaatgtggaggcacctctc
cacacgatcggcgttgacgtgtcacgagaggaacggtatcacaagtgcctgtcttgttac
gagaagctctcggcaatacgggcgatcttgctgaagaagcaatcgacttccggcaaactt
ggtgcctcattccgcgagctagcggtgctcatcaggagtttggagtga

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