Pogonomyrmex barbatus (red harvester ant): 105430880
Help
Entry
105430880 CDS
T04903
Name
(RefSeq) nipped-B-like protein B isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pbar03036
]
105430880
Chromosome and associated proteins [BR:
pbar03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
105430880
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
CCDC71L
ELMO_ARM
HEAT_GCN1_C
Motif
Other DBs
NCBI-GeneID:
105430880
NCBI-ProteinID:
XP_011642944
UniProt:
A0A6I9WIV2
LinkDB
All DBs
Position
Unknown
AA seq
2255 aa
AA seq
DB search
MPERIKLKMNGVVPSVPITTLAGIASLTDLLPEMPLPTPLPQTLTNKSLLFHPRVAEEAQ
ILLSVRDENLVPQLIMSLSQTSSDHIELKDNYPNTEQSLENEQNTPELLKAILQINPHVF
RGPQHNSPRNWTQGTPMLHANQSPASYGRFSPSYSSSSGSRQTPQGSPAHPTAARSVLPP
PVASGIAHAQHPRMPITPQNHADISQMSPFAVPSPSPRSNVMTEQTRTLTTPQHMQEDAN
CINPLSNVALQPNMYSPAHMSSPNAPLASLTNITPQHNMAGMTPQHNMHVTSPMRNVPLQ
QHPVMGMQQPLYDPMMNQQVHHALGSGQALDINNAVQENQQFLLDPVAGLPDIDLSMENI
DAKQGVDHAIQHLLPTSQTTSYPNIHAADMVNVLDPAAASMAPNVQHQQNNNSDKTMKLS
GTEKLKEPIVMLSRLSLADQTLMQKSLAAFAEKSPNRAAKMGISNRDDASKTDSESDEEI
GKNNKYFKARAKERQVQREKEKAERRKSEDKGRRRKRITDDDEEDDKRDTSYTPTKPKIR
KIEKKLVPVLAKLSVEELMETNTYQRFNSTIETIFENTEDITANADLEDDGDVPPEMLIP
KYQLHDLCTEAAKLKTLGAMESIPTDKLVRLLNILEKNIRDGARVSPLVDPDDDVEEGRL
WMQLAMERVQRAVDASLIALHIMTSSNMPKTVYLEDVIDRIVIFMKFQLQNTIYPSFDPV
YKIDTKNKTDNFNSSGRKKRGHMKEVREKSILQVYNKMHELVGLLAELLNIQVLTDTSVL
HASSLGVAPFFVESVSDLQLSALKLVTVIFTKYEKHRRLLLDDILASIARLPSSKRSLRT
YRLNSEDYIQMLTALVLQLIQCVVVLSDSKSKEDEEKKPSHVDADVFIINRYETATRIAG
NFLTVFLNKCGSKGEEIDYRPLFENFVQDLLATVNKPEWPAAELLLSLLGNLLVGHFSNK
SSDMSLRVASIDYLGVVAARLRKDAVSSQCKLSTIDQIIRDIKLEQQKDSDYDQIKDKEI
IGLSEDEERTVFLQKVLLDYLAVNGTKDPALGYARHFYLAQWYRDCALEKSRVGQSKNSP
SKKIHKKRAKKKNRHHSSDQDTESELDEQDPDENDNNEQKNSEAYRIIEEKKKYIVSRIR
PCSTGTKPDILQTYIDYNSAELISQYLASKRPFSQSFDRYLKQILHVLTESSIAIRTKAM
KCLTMIVEADPSVLARADMQLGVKHSFLDHSTSVREAAVDLVGKFVLSRPELIDKYYDML
SARILDTGVSVRKRVIKILKDICMECPDFPKIPEICVKMIRRVNDEEGIRKLVMEVFQNM
WFTPVRERPSLDSESLLRKVMNITDVVAASKDMGLEWFEQLLVSLFKPKEDKDDSTKMQT
EPPRALLTACKQIVDCLIENVLRLEETNLDSEKSEKKGSSQRLVACLTTLYLFAKIRPRL
LVNHAITLQPYLSLKCQTQGDYQIISSVAHTLELVVPLMEHPSETFLAQLEEDSVKLILQ
HDRSVVASCLSCLGSVVNNVTRNYKLIRDCFKKYYGHLTEYKSFYEKDPTNPTLIKYRPF
FRRALFTVGLLLRHFNFMDPEVIEGLADNIKDQVFETLSYFVHLDNDDIRHFTLSAIGSL
CIRHYEFMMLPELKELYHHLLTSEYALVHMRIQVLNNIEVYLQEEEKRMIKQDLEWAKLS
KQENLKEMGDVSSGMASTVIQLYIKEILESFLHVNISVRHAALKVIQLILAQGLVHPVQI
VPYLICMSTDCEKAVSHSADKQLQDIEKKYPGFIHMKSQFGIKLSYRLQKILQNDITVRG
MRTKEGEFPGALNGFLYTILRNTKQQRRAIVLSFLKHFDETAKTSLSQMLYLADNLAYFT
YQVQDEPLFIIHHIDIIISMSGTNLVQSFKEALLPKEGGTQSQSQSGQSVQSRHLSEQPT
GQATMGQPTVTGPDGQPKSDQLLSALEDEEDDEEDEEALLARLPGDTTLLREYITASQGF
LLLLTLRQHLKDLYGFSDAKIGQYSPSEAAKVYEKAVNRKSNLLFEPKATLQRLREGVTN
INEELDANGRKKLVKEYLDFKQLMLKFDPEEPDDDGGGNEAADTSGAGKHSAENPQAARI
PTLHPETDGGRIADNGAVAGDAAVLAVAASQQQYQLPPQSNLTASMEHPNNSVNSLPAMA
VTAVAAAAAAAAAAAATATPTATATPTPTVVAGPLATMPRVPKLTIQTHPDAREHRKHRA
HKTDKSVRKHKKKKRRRISDSSDSGEDYSDPDFLV
NT seq
6768 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacgaatcaaactcaaaatgaatggggttgtaccaagtgtgccaataactacc
ctcgctggtattgcgagtctcactgacttgttacctgaaatgcccctaccgactccgctg
ccacagactttgactaataaatcgctgctgtttcatccacgagtagccgaggaggcgcag
atattgctaagtgttcgcgatgagaatctcgtgccgcagttgataatgtcattatcgcag
acttcatcggatcacattgaacttaaggataattatccaaataccgaacagtcgttagaa
aatgagcaaaacacacctgagttgcttaaggcgatcttgcagataaatcctcacgtgttc
aggggacctcaacacaactctccaagaaactggacgcaaggtacgcctatgttacacgcg
aatcaatcaccggcaagttatggtcgtttttcgccgtcttattcgagctcctcaggctcc
aggcaaacgcctcaaggtagtccggctcatcccacggcagccaggtccgtacttccacca
ccagtggccagcggcatcgctcacgcgcaacacccgcggatgccgattaccccgcagaat
catgcagacatctcgcagatgtctccatttgctgtgccttctccgtcgcccagaagcaac
gttatgaccgagcaaacgagaacgttgacaacgcctcaacatatgcaagaggatgcgaat
tgtataaatccgttatcaaatgtagcccttcaaccgaacatgtactcgccggctcatatg
agttctcccaatgcaccgctggcatctctcaccaatataacaccgcagcataacatggct
ggtatgacaccgcaacacaatatgcacgtaacatctcccatgcgtaacgtgcctctgcag
caacatccggtcatgggaatgcagcagcctctttatgatcccatgatgaatcagcaagtc
catcacgcattaggtagcggtcaagcattggacattaacaatgcagtgcaagagaatcaa
cagtttcttcttgatcctgtagccggtcttcctgatattgatctgtcaatggagaacatt
gatgccaagcaaggcgttgatcatgcgatacaacatttattgccgacttctcagaccaca
tcctatccgaatatacatgctgccgacatggttaacgttttagatccagctgcggcaagt
atggcgcccaatgtacaacatcaacaaaacaacaattcggataagactatgaagctttcc
gggacggaaaagctaaaggagcccattgttatgttaagtagattatcgttggctgatcag
acgcttatgcaaaagagcctggcagcatttgcggaaaaatcgccgaatcgcgcagcaaaa
atgggcatttctaatcgtgacgacgcgtcaaaaactgattccgaaagcgacgaggaaatt
ggtaaaaataacaagtactttaaagctcgcgcgaaagaacggcaggtgcaacgagaaaag
gagaaagcggagcgacggaaaagtgaagataaaggtcgcaggcgaaaaaggataacggac
gacgatgaagaggatgataaacgggacacatcgtatacgcccacgaaaccaaaaatacgg
aagatcgagaagaagctagtgcctgtattagccaaactgagtgtggaggaattaatggag
accaatacgtatcaacgatttaactctactatagagacgattttcgaaaataccgaagat
attacggcgaacgccgatttagaagacgatggcgatgtgcctccagagatgcttattccc
aagtatcaattacacgatctttgtacggaagcggccaaactcaaaacgttaggcgccatg
gaatcgatacctacggataaactggtgagattactaaatatcctggaaaagaacatacgg
gacggtgctagagtgtctccgctcgtggatccggatgatgacgtcgaagaaggacgatta
tggatgcaattggcgatggaacgggtgcagcgtgccgtggatgcatcgttgatcgcgctg
cacatcatgacttctagcaatatgccgaagacagtttatttagaagacgtaattgatcga
atagtgatttttatgaaatttcagttgcagaatacgatctatccctcctttgaccccgta
tacaagatagatacgaagaacaagactgacaattttaattctagcggacgaaagaagaga
ggacatatgaaagaagtacgcgaaaagagcattctgcaagtttacaacaagatgcacgag
ttggtaggtctgttagctgagctattgaacatacaggttctaacagacacgagtgttcta
catgcatcatcgttaggtgttgcgccgtttttcgtcgaatcggtaagcgaccttcaattg
agtgcattgaaactcgtcactgtaatattcacaaaatatgagaagcatagaagattatta
ttagatgatatcctggcgtcaattgctagattacccagcagcaaaaggagtctacgtacg
tataggctcaactctgaagattacattcaaatgttgaccgcattggtcttgcaacttatt
caatgcgtagtggttctgtcagactccaaatcgaaagaggatgaagagaaaaagcccagt
catgtagatgctgacgtttttattattaatagatatgagaccgctaccagaattgctggc
aattttttaacggtattccttaacaaatgtggtagcaagggggaagagatcgattataga
ccgttattcgaaaattttgtgcaagatttattggcaacagtaaacaaacccgagtggcct
gctgctgagttgctattgagtcttcttggaaatctgttggtgggacatttttctaataaa
agctctgatatgtcgcttcgagtagcctccatcgattatcttggtgtggtagcagctaga
ttgcgtaaagacgcggtcagttcgcaatgtaaattgtcgaccattgaccaaattatacgg
gatattaaacttgagcagcagaaggattcggattatgatcagataaaggacaaagagatc
ataggactgagtgaggatgaagaaagaaccgtgtttctgcagaaggtacttttggattat
ctggctgtcaacggcacgaaggatccggctcttggatatgcgcgtcatttttatttagcc
caatggtatcgagattgcgcgttggagaagtcccgggtaggtcaatcgaaaaatagtccg
agcaagaagatacacaagaaacgagcgaagaagaaaaatcggcatcacagcagcgaccaa
gacactgaatctgaattggacgaacaagacccagatgagaacgacaataacgaacagaag
aattcagaggcttatcgaattatcgaagagaagaaaaagtacattgtcagcagaataagg
ccatgcagcacaggaacgaaaccggacattcttcaaacgtatatcgattacaattctgcg
gaattgatctcgcaatatcttgcgtccaagagaccattttcgcaaagttttgatagatat
ctaaaacaaattcttcatgtattgacagaatcgtcaattgccattagaaccaaggcaatg
aaatgtcttacaatgattgtcgaggcggatccgagcgtattggcgagagcagatatgcag
ctaggcgtgaaacattcattcctcgatcactcaacatctgtgcgggaggcagcggttgac
ttggtaggaaaattcgtattgagcagacccgaactgatcgataaatactatgacatgttg
tcggcaagaattctggatactggtgtgagcgtgcgaaaacgagttatcaaaattcttaag
gatatttgcatggagtgtccagattttcccaagattccagagatatgcgtgaagatgata
aggagagtgaatgatgaagagggcattcgaaaactcgtcatggaagttttccaaaacatg
tggttcactccggtacgagagcgtccctctcttgactcagaatcgctgttgagaaaagta
atgaatattacagatgttgtagcggctagcaaagacatgggactcgagtggtttgagcag
cttttagtaagtttgttcaagccgaaagaggacaaggatgacagcacaaagatgcaaaca
gagccgccgcgagctttattaacagcgtgtaagcagattgtggattgcctgatcgagaac
gtgctacggctagaagagacgaatctagattcggagaaatcagagaagaaaggttcgtcg
caaagattggttgcgtgtctgacgacgctctatctgtttgctaaaattcgcccgcggctg
ctcgtgaatcatgcgatcactttacagccttatctgagtttgaaatgtcagacacagggc
gattatcaaatcattagcagcgtcgcacatacgctcgaattggtggtgcctctgatggaa
catcccagtgaaacttttttagcacagctggaagaagattcggtaaaactgattttacag
cacgacagatcggtggtagcgagttgtttgtcatgtttaggctccgtagttaataatgtc
acacgaaattataaactgatacgagactgtttcaagaaatattatggacatttgaccgag
tacaaatcattttacgaaaaggatccaacgaatcctacgctaataaaatataggccattt
ttccggcgagcgctcttcacagtcggcttactgctgcgtcattttaattttatggatcca
gaggtgatagagggcctagcggacaacatcaaggatcaggttttcgaaacacttagttat
tttgttcatttggataatgacgatatccgacattttacattgtcggctatcggttctctc
tgcatacgacattacgagttcatgatgttaccggaattaaaagaactttatcatcattta
ctcacatctgagtacgcattagtgcacatgaggattcaggtgctcaataatattgaagta
tatttgcaggaagaagaaaagaggatgattaaacaggatttggagtgggcaaagttatca
aagcaagagaatttgaaggaaatgggtgacgtgtcgtcgggcatggcgagcaccgttatc
caactctacattaaagaaattcttgaatctttcctgcatgtcaacataagcgtgcgacat
gcggctcttaaagtcattcagttgatcttggcgcagggtttggtacatcccgtccagata
gtgccctatctaatctgcatgagcaccgactgtgaaaaggccgtgagccatagcgcggat
aaacagttacaagatatcgaaaagaagtatccgggcttcattcacatgaaatcgcaattt
ggcatcaagttgagctatcgattgcagaagatcttgcagaacgacattacggtgagaggt
atgcgaacgaaggaaggcgagttcccgggcgcgctcaacggtttcctctacacgatcttg
cgcaatacaaaacagcagaggcgggcaattgtattatcctttctcaaacactttgacgag
actgccaagactagcctgtcacagatgctatacctggcggacaatctcgcctactttaca
tatcaagtacaggatgagccactctttatcatccatcacatcgacattattatttccatg
tccggtacgaatctagtgcagtctttcaaagaagctctgctgcctaaagagggcggtacg
caatcgcaatcacaatcggggcaatctgtccaatctaggcatttatcagaacaaccaacg
ggacaagcgacaatgggacaaccgacggtgacgggaccggacggtcaaccaaaatctgat
cagttgttatcagctttagaagatgaagaagacgatgaagaggatgaggaagctcttctg
gccaggttaccaggcgataccaccttgctcagggagtacattaccgccagtcaaggcttt
ctgctcttattaacgcttcggcaacatctcaaggatctctatgggttttccgacgcgaaa
attggtcaatattcaccctcggaagcggctaaggtctatgagaaagcggtaaatcgcaag
agcaatttgctttttgagcccaaagccacgttgcagaggttgcgagaaggcgtgaccaat
atcaacgaagagctggatgcgaacggtaggaagaagctcgtgaaagaatatctagacttt
aaacaactgatgctcaaatttgaccctgaggaaccggacgatgatggtggtggcaacgag
gccgctgataccagcggcgctggcaaacatagcgcggaaaatccgcaagcggcaaggata
ccgacattgcatcccgagactgacggcggtagaatagcggataacggtgctgttgcggga
gatgccgccgttctggctgtcgcagctagtcagcaacagtaccagttaccgccgcaatcg
aatctgactgcttcgatggagcatccaaacaattctgtcaactcgctaccggctatggca
gtgacagcagtagcagcagcagcagcagcagcagcagcggcggcggcaacggcaacccca
acggcaacggcaacgccaaccccaacagtcgtcgcagggccactggcgacgatgccgcga
gtgccgaagctgacgatacagacccatccagatgcgagagagcaccggaagcaccgcgcg
cacaagacggacaaatctgtgagaaagcacaagaagaagaagaggagaagaatctccgac
agcagcgacagtggggaggattatagtgaccctgatttcctagtgtga
DBGET
integrated database retrieval system
