Pogonomyrmex barbatus (red harvester ant): 105430968
Help
Entry
105430968 CDS
T04903
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
105430968
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pbar04515
]
105430968
Cell adhesion molecules [BR:
pbar04515
]
Immunoglobulin superfamily
DCC/UNC5 family
105430968
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Neogenin_C
I-set
Ig_3
Ig_2
Ig_DSCAM-DSCAML_C
ig
Pur_ac_phosph_N
V-set
C2-set_2
Interfer-bind
C2-set_3
fn3_2
CRLF2-like_D2
Ig_J
Ig_5
Motif
Other DBs
NCBI-GeneID:
105430968
NCBI-ProteinID:
XP_011643132
UniProt:
A0A6I9WN17
LinkDB
All DBs
Position
Unknown
AA seq
1488 aa
AA seq
DB search
MEPRPLAVLLILLLTALAGRVNAGGLDFTIEPQDVVVEQGGSARLDCEAKSAFGMPNIHW
RTDDGQPITFIGDSYRSQLANGSLYINSVYSGSAELTGSYQCLASIDNVGAIVSRTATIK
LASLPGFEREPQDTMVYAGQIAYLSCALPASSSLLKIQWLKDEHPLILDESRMTILPSGA
LEIDDVQYRDVGSYRCNASGYGQYRLSNKAQLGLLSSDIDEGSSAPVFIAQPLQQVVIEG
SDVTLECAANGYPKPTILWLKDGVALDLTSLDSRYREVAASSLKIMNVKESDHGSYQCRA
ENMVDSLDAVAELIVQVPPKFIKKPEDKVASESQDLEFECEIYGKPEPKITWLKNGERIT
LSAYWQIVNGYNLRINGLLPIDAGIFQCTGSNPAGSVQASARLTINQPKRMNSHRTTTPK
TAPKKKLLLHRQLYNKTWQHPSTLLGHTFSMPNPPLSISPSDDPADLLPSSFKYPNSLYD
PDSHFVDDTDTLEAFDGGGVPSPPRNLSLVIGTARFVTLRWQEPENANSETLNYFIHYKQ
EGAMRERVVNTQQKLEAMIRGLQPNMKYQFHVVAQNSRGTSASSNVLQVTTLIEANVPGP
PINLEGHATSSMSITLSWEEPQVINGRISKYIITFMKDDSEDEIRETTSTTYELVDLVPY
TEYSIRVQAVNENGAGAFSKDIVIRTHSAQPTQPPHNVTLEAASSTSIIIRWEPPLEGQN
GIITGYRIRYRRYPHDSRSGDRRSPITVTTEGNQRLYVLNGLEKHVVYQVRICAFNVNGT
GPWTEWTKIETYENDLDETKVPNAPSNLRANAMADSILVSWHPPKDQSIKVRKYKLGWGK
GYPDVEIQVLDGKQRSYAIKPIEPTTEYVISLRATNNVGDGQPAYANVRTPERFVTESAV
PLIPPVGLKAIVLSATTVVLYWTDTTLSKSQYITDSRYYVVRYTSYHHSSSPRYKYYNAT
DLNCMIHDLKPNTQYEFTVKLVKGKRSSPWSMVVLNQTQEAAPSTAPRDLVIQTVEDRPT
SVLLHWQPPKQPNGQITGYLIIYSTDNTKWDRDWLVEGVIGDKVDAIVKGLHPNTMYYFK
IQARNSKGYGPFSTTVSFKTPPSNGMDELHDQDGRSFSNLLIYIIVGLSILFITGISVVV
VICCKRNPSSSDRKKGYMKDSNQKTNIKPPDLWIHHDQMELKALEKSSLNGEASTSGVTS
NTLPRSGNTEYNQDNIHGNSSSLDKRTYVPSYMGNTDEKCSTLSRQHSRGSHKPKLITLP
PVESTPLHQPIATATPIVNTSMSQPTIHTSCSDTSSVRQNYPRTVAQYSLNRAHVTLEPT
PESSPDSCNMPSSYEPLQSQLSYGTSGQSYSGNTQYAPGYGNNTQPMNNTVGIENNSSKR
LQGHPLKSFSVPAPPPQSAPSTPAQQKHGVSQVTVRPTMSGSPYKKAQGSSSQLTKNRLA
SVSNPTHTSEEVERLKPSYSTEELNQEMANLEGLMKDLNAITASEFEC
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atggagccgcgtcctctcgccgtcctgctgattttgttgttgacagcgctcgctggacga
gtcaacgcgggaggcttagacttcactatcgaaccgcaggatgtggtggtggaacagggt
ggttctgcgagactggactgcgaggcgaagagcgcctttggaatgccaaatatacattgg
cgtacggacgacggtcagccgatcacgtttatcggggatagttatcgatcacagctagca
aacgggtccttgtatataaatagtgtgtactctggtagcgcagaattaaccggaagttat
cagtgcttagcttccatagacaatgtcggagcgattgtctctcggacagctacaattaaa
ctagcaagtctccctgggtttgaaagagaacctcaagataccatggtttatgcaggacaa
attgcatatttgagttgtgcgctaccagcttcctcgagtttgttaaaaatacagtggtta
aaggacgaacatcctttaatactcgatgaaagtcgaatgacaattctaccatcaggcgca
ttggaaatcgacgacgttcaatatcgtgatgtaggatcgtacagatgtaacgctagcggt
tacggccaatatagactgagcaacaaagcacaattaggattattatctagtgacatcgat
gagggatctagcgctccagtattcatcgcacaacctttacaacaagtagtcatcgaaggt
tccgacgtgactctggaatgcgctgccaacggttatccgaaaccgacgattctttggctt
aaagacggtgttgctctcgatttgacgtcactcgattctagatatcgcgaggtcgcagct
tctagtctcaagattatgaatgtcaaagaatcggatcacggttcatatcagtgtcgcgcg
gaaaatatggtcgactctctagacgcggttgctgaattaatcgtacaagttccaccaaag
tttataaaaaagccagaggataaagtggcaagtgagagtcaagatttagaatttgaatgc
gagatctatggaaaacccgaaccaaaaattacctggctaaaaaatggcgagcgtatcaca
ttaagcgcatattggcaaattgtcaatggatacaacctgagaatcaatggactgttacct
atagatgcaggaattttccaatgtacgggatcaaatcctgctggtagcgttcaagcctca
gcacgtcttacaattaaccaacctaagagaatgaattcccatagaacgacaactcccaag
acagctcctaagaaaaaactgttattgcatcgacagttgtataataagacgtggcaacat
ccgagtactcttctaggacacacgttctctatgccaaatcctccactttcaataagtccc
tccgacgatcccgcggatctcttgccgagctcgtttaaatatcctaattccctttacgat
ccagattcccattttgtagatgatacggatactctggaagcatttgatggaggtggcgta
ccctctccaccgagaaacctgagtctcgtcatcggtactgcgagatttgtaacactacgc
tggcaagagccagaaaacgcaaacagcgagactctcaattatttcatacattataaacag
gagggagccatgagggagagagttgtcaacacgcaacaaaaactggaggctatgatacgt
ggtttacaacctaatatgaaatatcaattccatgtagtcgcgcaaaattctcgaggaact
agtgcttctagtaacgtgttgcaagttacgacgttaatagaggccaatgttcctggacct
ccgataaatctggaaggtcatgcgacaagtagcatgagtattaccttatcgtgggaggaa
ccacaagttattaatggtcgaatatctaaatatattattacatttatgaaggacgacagt
gaagatgaaatacgtgaaactactagtacaacgtatgaattggtagatctcgtgccttat
acggaatacagtattagagttcaagcggtcaacgagaatggcgcgggcgcgtttagtaaa
gatattgtgattcgaactcacagcgcacaaccgacccaaccaccgcacaatgttacctta
gaagcagctagttcaacgagtattatcataagatgggaacctccactcgagggacagaat
gggattatcacgggttatagaatacgctatcgtagatatccgcacgattcccgatctgga
gatcgacgatccccaatcacggtgacaactgaaggaaatcaacgtttatacgtgctcaat
ggcctcgaaaagcacgttgtgtaccaagtccgcatatgtgccttcaatgtcaatggaact
gggccttggacggaatggacgaagatagaaacatatgagaacgatttggacgaaacgaaa
gtacctaatgcacccagtaatctgagagcgaatgctatggcggattctatactagtatca
tggcatcccccgaaagatcagagcatcaaggtgaggaaatataaattaggttggggcaaa
ggttatcccgatgtcgaaattcaagttcttgatgggaaacaacgatcttatgccatcaag
cctatagaaccaactacggagtacgtaatatctttaagagcaacgaataacgttggtgat
ggtcaaccagcatacgcgaatgtaagaactcccgaacgttttgtaactgaatctgcagtg
cctttaataccacctgttggccttaaagctattgtgctctcggctactactgttgtatta
tattggacagacacaaccttatcgaaaagtcaatatatcaccgatagtcgatactacgtg
gtgcgttatacgtcctatcatcacagcagcagtccaagatacaaatattacaatgctact
gatcttaactgtatgattcatgacttaaaacccaacacacaatacgaatttacagttaaa
ttggtcaagggtaaacgaagctcgccatggagtatggtcgttttaaatcaaacacaagag
gctgcacctagcacggcacctcgggatctggttattcaaaccgtcgaagatcgtccaact
tctgttttattgcattggcaaccgcctaaacaacccaatggacaaattacaggatatctt
ataatttattctaccgacaatacaaaatgggatcgcgactggttagtcgaaggtgttatc
ggcgataaagtggacgctatcgtaaaaggtctacatcctaacacgatgtattattttaag
atccaagcccgcaattctaaaggatacggaccattctccacgacagtttcatttaaaact
ccaccaagcaatggcatggatgaattgcatgatcaagatggacgaagtttttctaatcta
ttgatttacatcatagtggggctgtcaattctctttattactggtatatctgtagtcgtt
gtaatatgctgtaaacgtaatccaagttcatcagatcgaaagaaaggatatatgaaagat
tcgaatcagaagacgaatattaagccaccggatttatggattcatcacgatcaaatggag
ctaaaagctctcgagaaatcgtcattgaatggcgaagcctctactagtggcgttactagt
aatacattaccgagatcaggcaatacagaatataatcaagataatatacacgggaattcc
agttcgctggataaacgtacttatgtgccaagttatatgggtaacactgacgagaagtgc
tcaaccctgagcaggcagcacagtcgtggaagtcacaaacctaaactaattacacttcct
cccgttgaaagtacacctttgcatcagcctatagccacagctacgccgattgtcaacact
agcatgtcgcagccgaccatccacacttcgtgtagtgatacgtcatcagtaagacagaac
tatccgcgaactgtcgcgcaatatagtttaaatcgagcgcatgtcacgttagagccaacc
ccggaatccagcccggattcctgtaatatgcctagctcgtacgagccattgcaaagtcag
ttatcatatggcacgagtggacagtcgtacagtggaaacactcaatatgcccctggttac
ggcaacaatactcaaccaatgaacaataccgttgggatagaaaacaacagtagtaaacga
ttgcaaggacatccccttaaaagcttcagtgtgccagctcctccaccacagagtgctcca
tcgacaccggcacaacagaagcatggtgtgtcacaagtgacagtaagaccaacaatgtct
ggaagtccgtacaagaaagcacaaggctcgtcctcgcaattaactaagaatcgcttagcc
tcagtgtcaaatccgacacatacttcggaagaagttgaacgattaaagccttcgtatagc
accgaggaattgaatcaagaaatggccaatttagagggtcttatgaaagatctgaatgcc
ataacagcatcggaatttgaatgctaa
DBGET
integrated database retrieval system
