Pogonomyrmex barbatus (red harvester ant): 105431060
Help
Entry
105431060 CDS
T04903
Name
(RefSeq) UV excision repair protein RAD23 homolog B
KO
K10839
UV excision repair protein RAD23
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03420
Nucleotide excision repair
pbar04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105431060
09124 Replication and repair
03420 Nucleotide excision repair
105431060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pbar03051
]
105431060
03400 DNA repair and recombination proteins [BR:
pbar03400
]
105431060
Proteasome [BR:
pbar03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
105431060
DNA repair and recombination proteins [BR:
pbar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
105431060
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
ubiquitin
XPC-binding
UBA_7
Rad60-SLD
Ubiquitin_2
Crinkler
TBK1_ULD
UBA_3
OTU1_UBXL
ALIX_LYPXL_bnd
Rad60-SLD_2
Dsc3_N
Ubiquitin_5
CUE
UBA_9
Ubiquitin_4
UN_NPL4
UBA_2
DUF4248
Motif
Other DBs
NCBI-GeneID:
105431060
NCBI-ProteinID:
XP_011643297
UniProt:
A0A6I9XDY3
LinkDB
All DBs
Position
Unknown
AA seq
362 aa
AA seq
DB search
MIITLKNLQQQTFTIEIDSSQTVKDLKEKIETQKGFPAEHQKLIYAGKILVDEQPLTEYN
IDEKKFIVVMVTKPKPGATPKTNEEQHAEGEKKEESTSSATTQPSSNPNVQDTTRAASNV
QEQPVAATPAAGQAESALLMGEDYNTMVNNIMDMGYEREQVVQALRASFNNPDRAVEYLL
TGIPAQLFEDPPEDPPEAQEQLQDQSQDPLAFLRLQPQFQQMRQVIQQNPQLLNNLLQQI
GSTNPALLQLISQNQEAFVRMLNEPVEPTSGTGARVLPTSGGGVAPAAAAAAGGAVNGGA
GTGGAATGVGSGLIQITPQDRDAIERLKALGFPEHLVVQAYFACEKNENLAANFLLSQNL
DD
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgattataacgctgaaaaacttacagcaacagacgttcacgatagagatcgactcgtcg
caaactgttaaggatctcaaggagaagatcgaaacgcagaaaggcttccccgcggagcat
caaaagttgatatatgctggaaaaatattagtagatgagcaacctttaacagaatataat
atcgatgagaagaaatttatagttgttatggtaacaaagcctaaacctggcgctacacct
aaaacaaacgaagagcagcatgcagagggtgaaaagaaggaagaatccactagctcggcg
actacacaacctagttcaaaccctaatgttcaggatactacacgagcagctagtaatgtg
caagagcaacctgtggcagctacaccagcagctggtcaagcagaaagtgccttgctaatg
ggagaagattataatacaatggtaaacaacatcatggatatggggtacgaacgtgaacag
gttgtacaagcgttacgcgcgagttttaacaaccccgatagagctgtcgaatatcttctg
acaggtataccagcacaactgtttgaggatccacctgaagatccaccggaagctcaagag
caacttcaagatcaaagtcaagatcccttagccttcttgcgtttgcaaccacaatttcag
caaatgcgtcaagtcattcaacaaaatccacagctgctcaacaatcttcttcagcaaatc
ggttccactaatcctgcccttttacagctcatttctcaaaatcaggaagcgtttgtacgc
atgctcaatgaacctgtggaaccaactagtggaacgggggcgcgagttttgccaacatcc
ggaggtggtgtagcacctgcagctgcagccgcggcgggaggcgctgtaaatggtggagct
ggtacgggtggtgcagcaacgggcgtaggatctggtttaatacagataacaccacaggac
agagatgctatcgaaaggttgaaggcgctaggtttcccagaacatttagtcgtacaagcg
tatttcgcatgtgaaaagaatgaaaatcttgctgctaatttcctactttcgcaaaacctc
gatgactga
DBGET
integrated database retrieval system
