Pogonomyrmex barbatus (red harvester ant): 105431209
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Entry
105431209 CDS
T04903
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RBBP6
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pbar04121
]
105431209
Enzymes [BR:
pbar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105431209
Ubiquitin system [BR:
pbar04121
]
Ubiquitin ligases (E3)
U-box type E3
105431209
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DWNN
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-CCHC_2
zf-CCHC
U-box
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
105431209
NCBI-ProteinID:
XP_011643549
UniProt:
A0A6I9WNU8
LinkDB
All DBs
Position
Unknown
AA seq
1956 aa
AA seq
DB search
MSVHYKFKSTLDFDTVSFDGLHISVADLKKAIFHQKRIGKNTDFDLQITNAQTKEDYTDD
NALIAKNTSLIVARVPLTVQQKRSWDRTETPPFSNVKDEANLGRAVDLTRLDGSEEDKIR
AMMTQSTQDYDPSNYMKIRGANQTGDVPANYRCYKCHQPGHWIKNCPLGINQEPIEIKKS
TGIPRSFMVPVEGPLVPGAMMTPTGHYAVPAIDHQAYKEGKKERPPFSQDPEPVAEKPEI
PEDLLCNICKDLLTDAVMIPCCGNSFCDECIRTFLLESEEHECPDCNEKDVSPETLIPNR
FLRNAVMNFKNETGYAKRQTYRPSAQSTGQTTASTDQPKIETQQAASHVSSQAKTVQPSV
VSNIPSQEPVELQSTNVESTSQHFPTTVSSSQPQSSTTLPESTSESQLQSDSVTKLTTDE
ETEVPPPPGTEPLLPIPAIVSSPERERERSDPSNRDKKERDNEYSGERQSRERRRSFSRD
GHRDRSGERGRRIENLRPLNRNRNRSLSPRHSQHGEYPSSVLPHLMNPPPSKGYQGHLAD
DGHYPSAMHYDSGIRRSNEDRAGTPTVDEPHLHVPSSGNQPPLLPFPPGEERIPAPNYNQ
PPPNVPPHNPPHNPSHNAPLLPDPYMSHRIPIYPHQQGHYGGPPRYDRPPYQQQVYRPSQ
PPRNYNGPPRPMRGLHHMGYRNSQPPPPGLGRNVHNGNPPGIIDDPLEAFERMLREKDER
DRRLGKHRRRSRTRSRSRSYSRSRSRSFGRRSPFTSRISRSRSPPSKRRSSRSPLPLRPR
SRTPKRRSRSGSFSISRSRSYSRSQSPRLSPSRDRERDRERDRDRERDRDRDRDRDRDRE
RDRDLLPRYRSPIRSPPRFQRERDRERDRPRSREPRDGYNTYYGDSPAHDYQFRDRERDL
PPRERPLPRYPIGRNQPSQHNIPPLMSHLVTGSHPPPPLMSLGPSPTDRKDYYDSYNRYP
GPPPSQRFGSPLRDLSSHKRFDDVAPPGTEGYYDLSPPGVEHSERSSRDDRERRSLRDQE
DREHSSKDRDNEERDRLRDDRGREREDRMRERDDRDRRIVNREDRDRQIPPREHEDRIRE
KDERDRREKEKERDDRHIRDRRDDDRHVEKKDYDKDRYRDDRDRHRQDDKNRLREKDRRE
REYEFEKDRDRHERYERRSMERKKNRKSLSPYSQKSRGDPKDLSPERSTKKKEKDHEEKI
EEKKKEKKIKEKKKKKDSDDKEKKKKKKKDKKSNQKDAAKDDPTIKTMETDNLLIESKTN
NDTLSSPLKIDSIKACNEEDNMQNRIECVSNEVAIAPIKEEFEDKSLAMNPEPPEFNESS
PGSGRLDRTEFGTNPPNPNFKPIPELKSDMKPIDSLYGGLDDTEINTVITEKYSLLSEHS
QTETKEATTVLLATAEKSPKKDEFLAPIPELSKWERDDTIEKPDDDDDDASGSPTEKIQR
EDEPKSVKMVTSEVLKRAENAIFQKAINAIRPIEIKKISESRKILYQNPEPKVLETVESA
NREPRKSVNVTINVGRNERNVEITEPAKKAKLDRTKFKPVPETAYSPTRLSAKERLGEKI
EDSKERKISPIKGFLERRDSKNESQSRSRSPRREKRLSSPLLERRVESSSLSLTTTSSER
KVFLEERKRDNKDRGDRSKERSDFRGDRHGSELKAERESRIDCRTDFRSSRNDIKGERMD
KDRDKERDREHRGRTPPSVCAFKRTEISKIGLLKSKDDEEEKRRDKKSREEKKRKKEHRS
RSKSKEHKKRKXKKHKKDKDKNQEKKQKHKESTVSRDKSDGNETKVSYENIEPPLVDSLK
KQRKNPRLVSDRKRSILDEANFEPDYSASDSESDGEEGKVLPPTKKLKLDETELDKEMEM
KSLKKRSKSSSSEDTSSSSDTTSSDSESSDESHKKKRKKHKKHKKKKSVKKDSSSDSDTY
SDSSDSSSDEEKHKKKSKKSKSKSKQSKKKKKSKHK
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtacactacaaatttaaatctactttggactttgataccgtgtcgtttgatgga
ctgcatatttcagtggctgatttgaagaaggctatatttcatcagaaacgtatcggcaaa
aacacagattttgatttacaaattacaaacgcacagacaaaagaagattatacggatgat
aatgcattaattgcaaaaaataccagtcttattgttgccagagttccattgactgtccaa
cagaaacgttcttgggatcgaactgaaactcctccattcagtaatgtaaaagacgaagct
aatttaggccgagctgtagatctcacaagattagatggctcagaagaggataaaattcgt
gcaatgatgacacaatcaactcaagattatgatccatcaaattacatgaaaattcgtgga
gccaatcaaactggcgacgtacctgcaaattaccgttgttataaatgtcaccagcctgga
cactggataaaaaactgtccattgggaataaatcaagaaccaattgaaataaagaaaagc
acaggtattcccagaagttttatggtaccagttgaaggacctttggtacctggtgccatg
atgacacctacaggacactatgctgttcccgctatcgatcatcaagcttacaaggaaggt
aaaaaggaacgaccaccattttcgcaagatccagaacctgtagcagaaaagccagagata
ccagaggatttattatgcaacatctgcaaagatcttttgacagatgcagtaatgatccca
tgttgtggaaattccttttgtgacgaatgtattcgtacgtttttattagaatctgaggaa
cacgaatgcccagattgtaacgagaaagatgtgtccccggaaactcttataccaaatcga
tttttacgtaatgcagtaatgaattttaaaaatgaaactggttatgctaaaagacaaaca
tatcggccttctgctcaaagtactggacaaaccacggcgtcaactgatcaaccaaaaatt
gaaacgcagcaagctgcgagtcatgtatcttctcaggctaaaactgtacaaccatctgtg
gtttctaatattccatcgcaagaacctgtagaactgcaatccactaatgtcgaatctact
tcgcaacactttccaaccactgtctctagttcgcagccacaatcgtcaaccactctgcct
gaatctacttcagagtcacagttgcaaagtgactcggtaacaaaactaacaactgatgag
gaaactgaggtgcctcctcctccaggaacagagcctttactcccgattcctgccatcgtg
agctcaccagaaagagaacgcgagagaagtgatccatcgaatcgcgataagaaggaacgt
gacaatgaatattcgggagaacgtcaatcgagggaacgtcgacgaagtttcagtagggat
ggacatcgtgatagaagtggagagcgtggtcgcagaatcgagaatttacgaccattaaac
cgtaaccgaaatcgatccctttcgcccaggcattcccaacacggcgaatatccaagttca
gtgctacctcatttaatgaacccacctccctccaagggatatcaaggtcatttagcggat
gatggacattatccgtctgctatgcattatgacagtgggatacgacgatccaatgaagat
cgtgcaggcactccaacggtcgatgaaccacatttacatgtcccttcatctggtaatcaa
ccaccgttattgccgttcccaccaggcgaagagcgcataccggcaccaaattacaatcag
ccaccaccaaacgtacctccgcataatcctccacataatccatcacataatgctccgctt
ttgccagatccatatatgagtcatcgaataccgatatatccgcatcagcaaggacattac
ggcggaccgccgagatatgacagacctccttatcaacaacaggtatatcgaccatctcaa
ccacctcgaaactataatgggccaccgagaccaatgagaggattacatcatatgggatat
agaaattcacaaccacctccaccaggcttaggtagaaatgtacacaatggtaatccacct
ggaatcatcgatgatccattggaagcgttcgaacgcatgctcagagaaaaggatgaaagg
gaccggcgtttggggaagcatagaagaagaagcagaacacgatctcgttcacgtagctat
agtcgatcgagatcacgttcttttggtcgtagatcgccttttacatctcgtatcagtcga
tctcgcagtccgccatcgaaacgaagatcatcaagatcaccgttgcctctcagacctcgt
agtcgtaccccaaaacgtagatccagaagcggtagcttctctatcagcagatctaggtca
tattcccgcagtcagtcgccaagactatctccatcgagagacagagagagagacagggaa
agagatcgtgatcgtgaacgcgatcgcgaccgtgatcgtgatcgtgacagagatcgcgag
cgagatcgcgacttgttgcccagatatcgatcgccaatcagatcacctccaagatttcaa
agagagagagatcgtgaaagagacagaccgcgatcacgcgaacctcgagatggatataat
acttactatggcgattcgccggctcatgattatcagtttcgtgatcgtgagcgcgatttg
ccgcctagagagagaccattgccaagatatcctataggaagaaatcagccgtcccaacac
aatataccgccgttgatgtcgcatctagtcactggaagtcacccaccaccaccgcttatg
tcattgggaccttcgcctacggacaggaaagactattatgattcctacaacaggtatccc
ggacctccaccatcacagcgtttcggcagtcccttaagggatctttcatcacataagcga
tttgatgatgtagctccacctggtactgaaggttattacgatctctcaccaccgggtgtc
gaacattccgaaagatcatcgagagacgatcgtgaaaggcgttctctaagagatcaagaa
gatcgggaacactcatctaaggatcgtgataacgaagaacgcgatagattaagggatgat
aggggtcgcgaacgtgaggaccgtatgcgcgagagagacgacagagatcgtagaatcgta
aacagagaggatcgcgataggcagatcccgcctagagaacacgaggacagaatacgagag
aaggatgagcgcgacagaagagaaaaggagaaagaacgggatgatagacacattcgtgat
cgtcgagacgatgataggcatgtcgagaagaaagattatgataaagatcgttacagagat
gatcgagatcgtcacagacaagacgacaagaatcgattacgagaaaaagacagacgtgaa
cgcgaatacgagtttgagaaagacagagatcgtcacgagcgatacgagaggcgttcgatg
gagcgaaagaagaatagaaagagcttaagtccatactcgcagaaatccagaggcgatcct
aaagatttgtcaccagaacgaagtacaaagaagaaagaaaaagatcatgaggaaaagata
gaagaaaagaagaaagagaagaaaataaaggaaaagaagaaaaagaaagatagtgatgac
aaagagaagaagaagaagaaaaagaaggacaaaaaatccaatcagaaagatgcagctaaa
gacgatccaacgattaaaacgatggagacagacaatttgttgatcgagagtaaaacaaat
aacgatactttatcttcgccgctcaaaattgattccataaaggcatgtaatgaggaggat
aacatgcaaaatagaatcgaatgcgtttccaatgaggtagctattgcaccgattaaggaa
gaattcgaggacaagtctctggcgatgaatccagaaccgccggaattcaacgaatccagt
cccggcagtggtcgcttagatcgtacggaatttggtacaaatccgccaaatccaaacttt
aaaccgattccggaactcaagtcagacatgaagccgatcgatagcctctatggtggatta
gatgatacagagatcaacactgtaatcacggaaaagtattctttactttcggaacactca
caaaccgagacgaaagaagccactaccgtcttattagcaactgcggagaaatcgccaaag
aaagatgagtttctggcgccaatacctgaattgtccaaatgggaaagagacgatacaatt
gaaaaacccgatgacgatgacgacgatgcgagcggctcgccgacagaaaaaatacagagg
gaggacgaaccgaaatctgtcaagatggttacatcggaagtactgaaacgtgcggagaat
gcgatattccaaaaggcaattaatgcgattcgaccgattgagatcaaaaagatcagcgaa
agtaggaagatactgtatcagaatcccgagcctaaagtattggagacggtggagtctgct
aatcgagaaccacgaaagagcgtcaatgtgacgattaatgttggtagaaacgagagaaat
gtcgagattaccgaaccagcgaaaaaagccaaactcgatcgtaccaaattcaaacctgtt
ccagaaacagcctactcgccgaccagactgtctgccaaagagagactcggcgagaagatt
gaggatagcaaggagagaaagattagtcctataaagggattcctagagagacgcgactcc
aagaacgagagtcaatcaaggagtcgatcgcctaggagggaaaagagactttcctctccg
cttttagagcgacgcgttgaatcctcttcgttaagtctaactacaacgagtagtgaaaga
aaggtctttttggaagagagaaaacgagataacaaagatagaggcgatcgatcaaaggag
agatcagatttccgaggcgacaggcatggcagtgagttgaaagcagagagagagagtaga
attgattgtagaacagattttcgctcgagtaggaatgacatcaagggagagcgcatggat
aaagatcgtgataaggaacgagatcgtgagcatagaggcagaacacctccttcggtttgt
gcgtttaaaagaacagaaatatccaagattggtttattgaaatcgaaagacgacgaggaa
gagaaaagacgtgataagaagtcacgagaggagaagaagagaaaaaaggaacaccgcagc
agaagtaaatccaaggagcataagaagcgcaaangaaaaaagcacaagaaagataaggat
aaaaatcaagaaaagaagcaaaagcacaaggagagtacagtctcaagagacaaatcggat
ggcaatgagaccaaggttagttatgagaacatcgagccgcctctggttgattcgttaaag
aaacaacggaaaaatcccagactggtatccgatcgtaagcgtagtatacttgacgaagca
aacttcgagcctgattactcggcttcagactctgaatcggatggtgaggaaggtaaagtt
ttgccacccacgaagaaattgaaactcgacgaaacagaattagacaaggagatggaaatg
aaatccctaaaaaaacgatccaaatccagtagcagcgaggacacatcaagcagttctgat
acgacaagctccgactccgaaagcagtgatgaatcgcataagaagaaaaggaaaaaacat
aagaaacataagaagaagaaatctgtcaaaaaagatagcagttcggactcggatacttac
tctgattcatccgatagcagcagtgacgaagagaaacataaaaagaaatcgaagaaatca
aaaagcaaaagcaaacagtcaaaaaagaagaaaaaatccaagcataaatga
DBGET
integrated database retrieval system
