Pogonomyrmex barbatus (red harvester ant): 105431380
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Entry
105431380 CDS
T04903
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
KO
K24738
rabconnectin-3b
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
105431380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pbar04131
]
105431380
Membrane trafficking [BR:
pbar04131
]
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
105431380
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WDR55
ANAPC4_WD40
Beta-prop_TEP1_2nd
WD40_Gbeta
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
PAC11
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_VPS8
DSE1_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
WDR72_alpha-sol
Beta-prop_ACSF4
Beta-prop_SCAP
TRM82_WD
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
105431380
NCBI-ProteinID:
XP_011643827
UniProt:
A0A6I9WLN2
LinkDB
All DBs
Position
Unknown
AA seq
1521 aa
AA seq
DB search
MTAGTSLVVPIVLWGRIAPTHCISCVYLSRDQKTLVTGCYDGQICLWQVDPETLKMTPRC
LLVGHTAPIMCLSRASVVMEQNFIVSSSESGEMCTWDLVDGKCREAVKLNSVHTQMLPYV
STGGEDVRLFCSGYYPEVLVMDPFSLEVLFTLSSRVNPDWISALHVLRPAKRKGRFYVHT
NDVVLALTTTGTVKVWTLLGHENRNSEPLYEHESKQIRCLNALAMTCCPYNQRTVLIVCS
KYWQIFDAGDFSVLCSITAPCGERWMAGDFLAADRVILWSDEGHGYLYKLPAKILVQLDS
KLKGKALSSSVADNKNFHTAGAEYDQPYLYCTLTQPGDKPLSCPPAMRLVTVQRQNKTLK
YLLRGDSEGVVILWTVPEVTTQQLAQICQNDGSSPPTLSPTVKTSLTAAWDAMKPPPVGI
LDQLDTGDGHGIKLTACIYLPQQSRLVVGREDGSIIIVPATQTVMLQLLHGNHQQYDDWP
PHQVLLGHSGRVNCLLYPHGAAPRYDRTHLVSGSVDFAVCLWDLYAGTLIHRFCVHAGEI
TQLMVPPDNCSPRIQKCVCSVASDHSVTLLSLAERKCVVLASRHLFPVVTIKWRPLDDFM
IVGCSDGAVYVWQMETGHLDRVLHGIIAEEVLYACDENTIAAAGGSVAGGELGLANPAVH
FFRGLRHRNLSAIRHATQRGLHQLQQLHGGHGPDHGNQIKAKGSPLMIQGFRSNPKDPES
HILFFDIEALIVQLLSDEYGAMSPNSLEAQGLISAAEYQKVAALTQSASPDAHKKIVDFF
GRVKDKAGDVERMLKEKDRHGILAKMKEGAENVHTKLQAKAESVGLKPSTFDGKGDNWNN
SDAAKNNLKRNGAFSEPNATMEVAQLLLSLLHAWGMDPDLDRVCEGKLGLLRPMVPVSFG
VLSKGGYMSLLLPTWQTQLEPVGEPATQLEQRLPAELVRQERLTRAFTARAHWELSTTLT
SNHLLAVVALANTLMSMNNATFVPEQERNRKMHRPGNRGAVNWNKTEEENEEMYTVQQAQ
IKQGWSLLATLHCVLLPDKVAAQGGAKTFKRPQVEMMARRWQHQCVEIREAAQALLLAEL
GRMGSKGRKALVDNWSQYLPMYSTQEPIVPQPQSQTSPAAGSPVPPTESQPEEEDEEEEL
AEELSVARKPSSVAELKRKQTTAVVLLGVIGAEFGQDVTTTNQRRDNEQRRKSSIVEGFG
IGNNNLARHTSMALTHLLHAPHSPKLPMHTALRRAAIDLIGRGFTVWEPYLDVSKVLLGL
LEMCCDADKLVPNLTYGLPLTPQADTCRTARHALTLIATARPAAFITTMAREVARFNTLQ
QNAQTLNVNLGASVLTRAKPEILRIVEQLIDKMQSEMSDLLVEVMDIILHCLDPGHLKMK
PLNEVFPAVCRFNQVSHCPATRRIAVGGRSGQLALYELRGNVKCQTVPAHSASVTALAFS
PEGKFLVSYSCSENKLCFWQQTSSGMFGLGNSQTRCVKSYSTAPINDVARLNPMRLARLI
WINNRTVTLMLADGSETRFNV
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaggtaccagtttagtggtgcccatagtactatggggacgcatagcaccgacc
cattgtatctcctgtgtttacttatctcgggatcaaaagacactagtaacaggatgttat
gatgggcagatatgtctctggcaggtagatccagaaacattgaagatgactccaagatgt
ctgcttgttggacatactgctccaataatgtgcctcagtcgagccagtgttgtaatggag
cagaacttcatcgtcagcagcagcgaaagcggggaaatgtgcacttgggatctggtggat
ggaaagtgccgtgaagcagtgaagcttaatagcgttcacacgcagatgttgccctatgtt
tccactggtggagaagatgttagattgttttgttctggatactatcctgaagttttggtg
atggacccgttcagtttggaagtgctgttcaccctgagctcccgcgtcaatccagattgg
attagcgccttgcacgttttgcggccggccaaacggaaaggtcggttctacgtgcataca
aacgatgttgtgttggcactgacgacgacgggcacggtcaaagtatggacgcttctggga
cacgagaatcgaaacagcgagccattgtacgagcacgaaagcaaacagatccgctgcttg
aatgcactcgcgatgacttgctgcccctacaatcagagaacagtattgatcgtatgctcc
aagtactggcagatatttgatgccggcgatttctcggttctctgctcgataacggcccca
tgtggtgaacgttggatggcaggcgacttcttggccgccgatagagttattctgtggagt
gatgaaggtcatggatatctgtataaacttccggcaaagattctggtacaacttgacagc
aagctgaagggcaaggctctcagcagtagcgttgcggacaataagaactttcacactgcc
ggtgccgaatacgatcagccgtatctatattgtacgttaacgcaacctggagataagcct
ctttcctgcccgccggccatgcgactggtcaccgtacagcgacagaacaagactctaaaa
tatttgttacgcggggacagcgagggtgtcgttattctctggacagtgccggaggtgacg
acgcaacagctcgctcagatctgccagaatgacggatcatcaccgccgacgttgtcaccg
actgtgaagacaagtctcaccgctgcctgggacgcgatgaagccacctcctgtagggata
ctcgatcagttggacactggcgacggccatggtataaaactcaccgcttgcatataccta
ccacagcagagtcgactagtcgttggacgtgaggacggtagcatcatcattgtgccagcg
acacaaaccgtgatgctgcaattactccatggcaatcatcagcagtacgatgattggcca
ccacatcaagttcttctgggacattcagggcgagtaaattgcttgctttatcctcatggc
gcggcacctcgttatgatcgcactcatctcgtttccggttccgtagactttgcagtctgt
ttatgggatttatatgctggcacattaattcatcggttttgcgttcatgctggtgaaatc
actcaactgatggtgccaccggataattgcagtcctaggatacagaaatgcgtttgcagt
gttgcgtcggatcacagtgttacattgctctctttagcggagaggaaatgcgtcgtattg
gcttcgcggcatcttttcccggtcgtaactattaaatggagaccattggatgactttatg
atagtcggatgctcggacggtgccgtatacgtctggcaaatggaaactggtcacttggat
cgcgtactgcacggcattattgcagaagaggtgctctatgcttgcgatgaaaacacaata
gcagcggccggcggatccgtcgccggcggtgaactaggactagccaatcctgctgtgcat
ttctttaggggtttgcgccatcggaatctgtcggcgattagacatgcgacgcaaagaggg
ctacatcagttacaacagcttcacggtggacacggtcccgatcatggaaatcaaataaaa
gctaaaggttcaccgctgatgattcaaggattcagaagtaatccaaaagatccagagagt
catattctattcttcgatatagaagcgctgatagtgcaattacttagtgacgagtatggt
gccatgtcgcccaattctttagaagcacaaggacttatttccgcagcagaatatcaaaag
gttgcagcactcactcaatccgccagtcctgatgcgcataagaaaattgttgactttttc
ggtcgcgtcaaggataaggcgggtgatgttgagcgaatgttgaaggagaaggatcgtcac
ggtatattggctaagatgaaggaaggtgcagagaatgtgcatactaaattacaggccaaa
gcggaaagtgtcggcctcaagccgtcgacatttgacggcaaaggcgacaattggaataat
agcgatgcggcaaagaataatctgaagcgaaacggtgcattcagcgaaccgaacgcgaca
atggaagtagcgcaattacttttaagccttctgcatgcatggggcatggatccagacttg
gatcgagtttgcgaaggaaaattgggtctattgcggcctatggtacctgtttcatttgga
gtattatctaagggaggttacatgtcactattgttaccaacttggcaaacacagctcgag
ccagtcggtgaacctgcaactcaattagagcaacgcttgccagctgaattagttcggcaa
gaaagactcactagagcatttacggcaagagctcactgggaattgtcgacaactctaacg
agtaatcatttactagcggtagtcgctttagcgaatactttaatgtcgatgaacaatgca
acgtttgtacctgaacaagaacgaaaccgcaagatgcataggccaggcaatagaggagca
gtaaattggaataagacagaagaggaaaatgaggaaatgtatacagtacaacaagcacaa
atcaagcaaggatggtctcttctagctacattgcactgtgtattattacctgataaagtt
gcagcgcaaggtggtgcgaagaccttcaaacggccgcaagtggagatgatggcacgaaga
tggcaacatcaatgtgtggagattcgagaagcagcgcaggctttgttgctcgccgagcta
ggcagaatgggctcaaaaggtcgcaaagctctcgttgataattggtcacaatatttgcca
atgtatagtacgcaagaaccgatcgtgccacaaccacaaagccaaacttcaccggcagcc
ggaagtccggtaccaccgaccgaatcgcaaccggaagaagaagatgaagaagaagaatta
gccgaagagctaagtgtagcgagaaagccatcgagtgttgcggaattgaagcgaaaacaa
accacggctgtggttctgctaggcgtgataggtgctgaatttggtcaggatgtaactacg
acaaaccaaagaagagataatgagcaaagacgaaagagctcaatcgtagaaggcttcggc
ataggaaataataatcttgccagacataccagcatggcactcactcatttattacacgca
cctcattcaccgaagttaccaatgcacacggctctacgaagagccgcaatcgatcttatt
ggcagaggattcaccgtgtgggaaccctatcttgatgtatccaaggttctattaggtcta
ttggagatgtgttgtgatgcagacaagttagtgccgaatctaacatacggccttcctctt
acgccacaagctgacacttgtcgcacggcacgtcatgctttaacgttgatcgctaccgcc
agaccagctgcctttattactacgatggctcgcgaagtagccaggtttaacactcttcaa
caaaatgcccaaaccttaaatgttaatttaggtgcaagcgtgttaaccagagcgaagcca
gagattctcaggatcgtcgaacaactaattgacaagatgcagagtgagatgagcgatctt
ctcgtagaggttatggatattattctacattgtcttgatccaggtcatttaaagatgaaa
cctttgaatgaagtatttccggcagtgtgtagatttaatcaagtcagtcattgtccggca
acacgcaggatagcggttggtggtcgcagtggtcaattagcgttatatgaattgcgaggt
aatgtcaaatgccaaactgttcctgctcattctgcatcggttaccgcattggcattttca
ccagaggggaaatttctcgttagttattcttgttccgagaataagctgtgtttctggcag
caaactagcagtggcatgtttggcttgggcaactcgcaaactcgttgcgtgaaatcgtat
agtaccgcgcccatcaatgacgtcgcccgattaaaccctatgcggttggcacggttgatt
tggatcaacaatcgcacagttaccttaatgctcgccgatggttcggaaactcgcttcaac
gtttga
DBGET
integrated database retrieval system
