Pogonomyrmex barbatus (red harvester ant): 105431613
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Entry
105431613 CDS
T04903
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbar03009
]
105431613
Enzymes [BR:
pbar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
105431613
Ribosome biogenesis [BR:
pbar03009
]
Eukaryotic type
Other ribosome biogenesis factors
105431613
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_fdxn-like
NSUN5_N
FtsJ
RsmF-B_ferredox
Motif
Other DBs
NCBI-GeneID:
105431613
NCBI-ProteinID:
XP_011644194
UniProt:
A0A6I9WMK0
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MVPVCKTTDLRKRSIPLSCIIQNVAGIYGLSVNTLQALSRIDLLLHKTQILTEQPRLDPW
LARVLVTELLWRNKCLKSRSKPVLTILAYESKLREEFKSFERIETTIVRTEKVQRPRYVR
VNTLLLSVEEAISNFQEEGWRLLPKSITYSSYLQSLSRLSKPYFIQDLHVPEVLVFPSST
LFHQHSGYQNGKLILQDKASCLPAHLLNPVSGSVVLDMCAAPGMKTTHMAAKLQNYGKIY
AVEIDAMRFETLCGQIKKTCSFCVELVNQDALTLNPERYSDVEYILVDPTCSGSGIVDRP
KQSNMDDKPEAERLQNLQSFQVYLLRYALFNFPNAKKIIYSTCSLYPEENEKVIDEVLAD
IGNAYHLVPIRQLLKNNWTNFSSKEYKCSDTCLYSKPNDDYCNGFFIAIFERNFDVILPK
CKLKGGNEYRNLKADLNVEKNNTAKPVAHKRKKHGEKKKDEISIDEHITNVSTDIVEFVP
EIKSKVKIEKNNKETKTIDVCNDLSNINHKEMLNESEDILRKRASENMKIKKSKKRRLKH
ENILQIEEDEEMMEIDHVGKQINEEIANQMPKRKRKEKRKNEKVTKIDEMYVREVEQDSE
IEPSKKKKKHKEKY
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggtgccagtttgtaaaactactgatttacgtaaaagaagcatcccattgtcatgtata
attcagaacgtggccggcatatatggcctctcggtgaataccttgcaagcgctatctcga
atagatctactgcttcacaagacccaaattctgacggaacaaccgcggttggatccctgg
ctagccagagttctcgtaacggagcttttgtggcgcaacaaatgccttaagagtcgttcc
aaaccagtcttaaccatactagcttatgagagcaagctacgagaagagttcaagagcttc
gaacgcatagaaactaccatcgttcgtacagagaaagtgcaaaggcctagatatgttcgt
gtcaatactctcctgttatcagtggaagaagccatttccaactttcaggaagaaggatgg
cgattattgcccaaaagcataacatattcttcatatttgcaatccttatcacgattatca
aaaccatatttcatacaagatctacatgtaccggaagtgttggtttttccatcttcaaca
ctgtttcatcaacacagtggttatcaaaatggcaagctgattcttcaagataaggctagc
tgcttgccggcgcatttattgaatcccgtcagtggctccgtagtgctggatatgtgcgct
gcgcccggtatgaagactactcatatggcagcaaaattgcaaaattatgggaagatttat
gctgtagagattgatgccatgagatttgaaaccctatgcggtcagataaaaaagacttgt
tccttttgcgtagaacttgttaatcaagatgccttgactctcaatccagagcgatattcg
gatgtagagtacattttagtcgacccgacttgttctggatcaggcattgttgatagacca
aaacaaagcaatatggatgacaagcctgaggcagagcgtctgcaaaatctacaatcgttt
caagtttatcttcttagatatgcactgttcaattttccaaatgcgaagaaaataatctac
agcacttgttctctttatcccgaggagaatgaaaaagtaatagacgaagttctcgctgat
attggtaacgcttatcatttggtaccaattagacaattgctcaaaaataactggacaaac
tttagttccaaagaatataaatgcagtgacacatgtttgtactcgaaaccgaatgacgat
tattgcaacggtttctttatagcgatattcgaaaggaactttgatgtgattttaccaaag
tgcaaactcaaaggtggtaacgaatacagaaatcttaaagctgacttaaatgtcgagaaa
aataatacagcgaaaccagttgcacataagcgaaaaaagcatggagaaaagaagaaggat
gaaatctcaattgatgaacatataaccaacgtatcgacagatattgttgagtttgtaccc
gaaattaaaagcaaagtaaagatagaaaaaaataacaaagaaacaaaaactatcgatgtt
tgcaatgatttatccaatattaatcataaagaaatgttgaatgaatctgaagacatatta
cggaaaagagcatccgaaaatatgaaaattaaaaaatcaaaaaagcgaaggttaaagcat
gaaaatatacttcaaatagaagaagatgaagaaatgatggaaatcgatcatgttggaaaa
caaattaacgaagaaattgcaaatcaaatgccgaaaaggaaaagaaaagagaaaaggaaa
aatgaaaaagtcaccaagattgatgaaatgtatgttcgagaagtggaacaagatagtgaa
attgaaccatcgaagaaaaagaaaaaacataaagaaaaatattga
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