Pogonomyrmex barbatus (red harvester ant): 105431671
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Entry
105431671 CDS
T04903
Name
(RefSeq) LOW QUALITY PROTEIN: very low-density lipoprotein receptor-like
KO
K20053
very low-density lipoprotein receptor
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pbar04131
]
105431671
Membrane trafficking [BR:
pbar04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
105431671
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
DUF5050
SGL
EGF_LRP2
EGF_3
Motif
Other DBs
NCBI-GeneID:
105431671
NCBI-ProteinID:
XP_011644307
UniProt:
A0A6I9WMU3
LinkDB
All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MGRESRGVLLLVALAVLAAADAFSTDSKLACPLRQFRCANGRCIPISWVCDQSDDCTDNS
DESPEECKNTQECKDTEFKCGNGRCIPNIWHCDGDRDCPDGTDEDPAVCRPKPCSEREFE
CSPGHCIPNIWVCDRQIDCPNDLDEKNCHRTKTCSPEQFTCHSGNGECVALTWMCDDNPD
CSDGSDEAECNDTCRSDEFTCANKHCIQQLWVCDNDNDCGDNSDEKGCGPKTCNPNTDFA
CSENYCITSRWRCDGDYDCPDRSDEIGCKDIQNGKKTSHCDKEFDCDDGVTCIHLTWVCD
GEKDCPNGADESAQRCHNVTCXXXXYDCANRSIFQQSICVGHLYCNGKTDCADGSDEKNC
TSKVVSCDPRIQFECSEGSCIPLENVCNKNPDCIGWEDESTELCGVNECTKNNGGCSQIC
VDLPIGYRCDCHAGYRLIDNRTCDDIDECLEPGSCSQFCQNEKGSFKCSCAAGYLKDPRN
LTRCKAAEGHASLLFARRHDIRKVALDRQEMTAIVNNTKMATALDFVFRTGMIFWSDISE
KKIYKAPIDEGNERTVVIENDFTTSDGLAVDWIYSHIYWTDSGKDTIELANFEGNMRKTL
IRDRIQEPRAIALNPLEGWMFWTDWSDEARIERAGMDGSHRSVIVGNDVKWPNGLALDLI
GKRVYWVDAKLNIIGSCNYDGTGRRTVLYSPDSLRHPFSITTFEDYVYWTDWDKETIFKA
NKFTGKEVEPVTSIRTLQHPMVVHVYHPYRQPDGMNQCQAVNGHCSHLCLPAPKINSRSP
LLSCACPDGLRLLPDGLMCVENVTTTVAPSTQTPTEPFQRLKPLNITTTINPLSPADAEG
KGNSVTESTDPGLVAGIVIGVVSVGLLLLALVAVLCYRHYLHRNVTSMNFDNPVYRKTTE
DQFSLEKNRFPLPAATVGEEAQEPLTSPGTNDYV
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggggcgagaatcccgtggcgtgctgctgctcgtcgcgctggccgtgctggcagccgcg
gacgccttctcgaccgacagtaaactagcttgcccgttgaggcagtttcgatgtgccaat
ggcagatgcatacctatctcgtgggtctgcgaccaatcggatgactgtactgacaattct
gatgaaagcccggaagagtgcaaaaacacccaggaatgcaaggacacggagttcaagtgc
ggtaacggcagatgcatacccaatatctggcactgcgacggcgatcgcgattgcccggac
ggcaccgatgaggatcccgcagtctgcagaccgaaaccgtgcagcgaaagagagtttgaa
tgcagcccgggccattgcattccgaacatatgggtgtgcgatcgtcagatagattgtccc
aacgatctggatgagaagaactgtcacagaaccaagacctgttcgccggaacaattcaca
tgccattcgggaaatggcgagtgcgtggcactaacatggatgtgtgacgacaacccagac
tgttcggacggttcagacgaggctgagtgcaacgacacttgccggtctgacgagtttacc
tgcgcgaataagcactgtattcagcaactgtgggtctgcgacaatgacaacgattgcggg
gacaacagcgacgagaaaggttgtgggccaaaaacgtgtaatcctaacactgattttgcg
tgttctgagaattattgtataacgtcgcgatggagatgcgacggcgattacgattgtccc
gatcgatccgatgaaataggatgcaaggatattcagaacgggaagaagacgagtcactgc
gacaaggagttcgattgcgacgacggtgttacttgtattcatctgacttgggtatgtgat
ggtgaaaaggactgtcccaatggagcagacgaatccgcacagagatgtcacaatgtcacc
tgcannnnnnnnntatatgattgcgcaaatcgctctatttttcaacaatccatatgcgta
ggtcatctgtattgtaacggtaaaactgactgtgccgacggaagtgacgaaaagaattgc
acgagtaaagtcgtaagctgtgatccacggattcagttcgagtgcagcgagggctcatgt
attcctctggaaaatgtctgcaacaaaaatccagattgcatcggctgggaggatgagagc
actgaactctgtggtgtgaatgaatgtacaaaaaacaacggtggatgctcgcagatttgc
gtcgatttgcctattggttaccgatgtgactgccatgcgggctatagactcatcgacaac
cgcacatgcgatgacatcgatgaatgcttagaaccaggtagctgctctcaattttgtcag
aatgaaaagggcagctttaaatgtagttgcgctgccggttatcttaaagatccgcgaaat
ttaacacgctgtaaagccgcagaaggacatgcgagtctattatttgcccgtcgacatgat
atccgaaaagtagctttggaccgtcaagaaatgactgctattgttaataatactaaaatg
gcaacagctttagactttgtcttccgtaccggaatgattttctggagtgatatcagtgag
aagaaaatttataaagctccaatagacgaaggaaatgagcgtacagtcgttattgaaaat
gatttcactacatcggatggattggcagttgactggatttatagccatatttattggaca
gactccggaaaagatactatcgaattggccaatttcgaaggaaatatgaggaagactcta
atacgagatcgcattcaggaacctagagcgatagcgctaaacccattggagggttggatg
ttttggacagactggagcgacgaagctcgcattgaacgagcgggcatggacggtagtcat
cgatcggtgatagtcggcaatgacgtcaagtggcctaatggcttagctttagatttgatt
ggtaagagagtatattgggtggacgcaaaactgaatatcataggttcctgtaactatgat
ggtactggcagacgaacggttctgtactctcctgatagtcttagacatccctttagcata
acaactttcgaagattacgtgtactggaccgattgggataaggaaacgatctttaaagct
aataaattcacgggcaaggaagtagaacccgtaacgtcaatcagaacgcttcaacatcca
atggtagtccacgtatatcatccttatagacaacccgatggaatgaatcaatgtcaggct
gtcaatggacattgcagccatttatgtttgccagcgcctaaaatcaactctagatcacca
ttattgtcatgcgcctgtcctgacggcttacggctattgcctgatggattgatgtgcgta
gaaaatgtcactacgaccgtagcgccatccacgcaaacacctacggagccgttccagagg
ctaaaacctctgaatattacaacaactatcaatccactatccccagcagatgcagaagga
aagggcaactcagtaactgaatcaacagatcctggtttagttgccggcattgtaataggc
gtagtgtctgtaggactgttattacttgcacttgttgcagtactgtgttataggcattat
cttcatcgtaatgttactagtatgaactttgacaaccccgtctacagaaagactacagaa
gatcagtttagtcttgaaaaaaatagattcccccttcctgcagctacagttggagaggag
gctcaagaaccattgacaagtcctggaacaaacgattacgtttaa
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