Pogonomyrmex barbatus (red harvester ant): 105431768
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Entry
105431768 CDS
T04903
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
105431768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pbar04131
]
105431768
Membrane trafficking [BR:
pbar04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
105431768
Protein recycling
Other Rab GTPase associated proteins
105431768
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Hen1_N
DExH14_plug
Motif
Other DBs
NCBI-GeneID:
105431768
NCBI-ProteinID:
XP_011644495
UniProt:
A0A6I9WN86
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MYSTKTPTLRIDEADLKCRNGCGFYGNAEWEGYCSKCHREHLQKRRAQAERVSHAQTLDA
DNANRSTSAGTHKGYEEKKIQQEKKYKLLNISFRKPVAKVQGYQELYHELLKDNPDLEKV
KVENRDLLLYIAKTPVEKDVRKCIHSFVIDILQNKDVKRIEELSEITQNFYHIFGKRLEN
STKYADISSDIKEKLLDYVERYAMTLLYRILFCPPFTTDEEKDLAIQKRIRQLNWVSGKN
LECRIHETSSEVRELVYTSITDLLNMDSAKAPQEKLACVIHCCRNIFLLLQQSVDGPASA
DEFLPALIFIVLKANPARLKSNINFITRFCNASRLMTGEGGYYFTNLCCAVSFIENLTAE
SLNMAEKDFNAYMSGECVPANTWESALMICESLHFMCEDITLLDDLQAKNTDIIKQAEEL
KNKMMDFKEKIRDDVSKVIERTPLLISHSQRVPTNLDSEDIESYQLPPPIIPQIYPHSVD
NMNGGVMTDLSSDLMRTSLVEDSVTPSPTFDFPSFIGDDSLEVSKGEDETSLISLDTQSD
LASGETQFFKKHMTDSLLDECPTPDTNLPPVLKPINSEDYHGFTVQGSNIPTIPCNTGDS
SITPADLNSDNYSGYYQNM
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtattcgacgaagacgccaactttacggatcgacgaggccgatctcaagtgcaggaac
ggttgcggattttatggcaatgcggaatgggaaggctattgcagcaagtgccatcgggag
catctgcagaaacgacgggctcaggccgagcgcgtgtcccatgcgcaaaccttggacgca
gacaatgctaatcgttcaacgagtgctgggactcacaagggctacgaggagaaaaagata
cagcaagagaaaaagtacaaattgttgaatatttcgttcaggaaacctgttgcgaaagtt
cagggatatcaggaattatatcatgagctactaaaggataatccagatctcgaaaaagtc
aaggtggaaaatcgagatttattgttgtacatagctaagacgccagtggagaaagatgta
agaaagtgcatacattcgtttgtgatagacatactacagaacaaggatgtgaagaggata
gaagaactgtcagaaataacgcagaacttctatcatatattcgggaaacgtctggaaaac
agcactaaatatgcagacatatcttcagatatcaaagagaaactgttagattatgtcgaa
aggtatgcaatgactttgttgtatagaattcttttttgccctccattcacgacagacgaa
gaaaaagacttggctatacagaaaaggatacggcaattaaattgggtgagtggcaagaat
ttggaatgtaggattcacgaaacaagttcggaagttagagaactcgtctatacatccatt
acagatcttttaaatatggattctgctaaagcacctcaagaaaaattggcatgtgttatt
cattgctgtagaaatatattcctcttgttgcaacaatccgtcgatggaccagcatccgct
gatgaattccttccagcgctcatatttatcgttttaaaggctaatccggcacgacttaag
agcaatataaattttattacgaggttttgcaacgctagcagattaatgaccggggaagga
ggatattactttacaaatctgtgttgcgcggtatcatttatcgaaaacttaacggcagaa
tctttgaatatggctgagaaggactttaatgcatacatgtcaggagaatgcgttccagct
aatacgtgggagtcagctcttatgatatgtgaaagtttacatttcatgtgtgaagatata
actttgttggatgacttgcaagctaaaaataccgatatcatcaagcaagcagaagaattg
aaaaataaaatgatggattttaaagaaaaaataagagatgacgtgagtaaagtgattgaa
cggacgccgctgttaatatctcacagtcagagagtgcctaccaatttagatagtgaggat
attgaaagttaccaattaccaccaccaattattccacagatatatccacactctgtcgat
aatatgaatggcggtgtaatgacggatttgtcgagtgatttaatgagaacatcattagtg
gaagattccgtgacaccgtcgccaacgttcgattttccatccttcattggcgacgatagt
ctggaagttagcaaaggcgaggatgagactagtcttatcagcttggacactcaatccgat
cttgcatctggcgaaacgcaattctttaaaaaacacatgacggacagtttattagacgaa
tgtcctacacccgatacgaatctgccacccgttttaaaaccgattaattcggaagattat
catggcttcacggttcaaggatcaaatataccgacaatcccatgcaacacaggcgattca
tccataactccggctgacttgaattcggataattattccggttactatcagaatatgtag
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