Pogonomyrmex barbatus (red harvester ant): 105431775
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Entry
105431775 CDS
T04903
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbar03019
]
105431775
Messenger RNA biogenesis [BR:
pbar03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
105431775
3'-5' decay
Other 3'-5' decay factors
105431775
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
AAA_30
ResIII
UvrD-helicase
AAA_22
AAA_5
PhoH
AAA_16
AAA_7
PIF1
SRP54
Mg_chelatase
Terminase_6N
PAM2
Motif
Other DBs
NCBI-GeneID:
105431775
NCBI-ProteinID:
XP_011644505
UniProt:
A0A6I9WN96
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MAAVEHKLDTSDGNVPYLTDFPKRMRHGWFRTNDPDSTLTCDPLPNVNIYLSGSPNCRIV
GKKGNHEWNFTIFTTGGQELQNVALISDDHRANFFLKSVQDQNGAEIGVTNGQEWYCSCP
DEVHPQKDKKQYLVTVGFTAERHDTYRQNLIFGFLNCPGYLQRICADYLDAKDYERIQKA
TIYQQSQIPLRWQDPYQFYSPFMPHANPREIKLSRIYPYPDKQNFVLTQDTLSDSRLTPR
NYRGRMHEMITLEEIARHEQLSRYNQISWLRLMAHYVLFNSDGSTIAKYTPPGELFAQIP
LSRDILEDTQSGRLLQRSCNSVFLKLWRKKAKYDVFEAHIEDKSSHFVYVRLSKECVTFW
DLEAHSELEVEVRFVLNRLNFCEWHLAVDSLEDMDLVFLVNEHRKTNDEIIGDFLQVDAG
NLSIFSSLLLDSPLNQEQKQAVTAITLSIKVPSPPVLLLGPFGTGKTFTIAHMLRMLVQN
TKNKILLCTHSNSAADLYIKEFFHIWYSSDKHPRLKPVRIYYKLRALNTVHPVVQQYCLM
DEHGRFRDPVAEDLQNCGLIVTTLATSSCLMSLKLSPTHIVIDEAAQAMECEALVALTLA
SRETRLLLAGDQMQLAPEIYSVLASERGLGVSLLERLFAYYPLEHPCRIHLCQNYRAHAD
IIKYTSETFYDGMVKPANMHLLKHPVMKPLIFYAVNGVEEQATCSTGYHHVTEAEEVANR
VLELRRAWPTQQWGPYNEGSIGVLSYYPEQVQRLRIELRKRLLFDVSVERVLNVQGKQFT
AVFISTVRTRISDRSSAEVKIKDYGFLTDPRLLNTALTRAKCFVAVVGDPVALLTIGSCK
DLWKKYLDVADLYGMDRKELQTHLNQVSKIQISPLNPHAREFFPRAPPLCFVQYIQVPIW
YPLIYPPQQPM
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtcgaacacaaactggacacgagtgacggaaatgtgccgtatctcacagac
ttccccaagcggatgcggcacggttggttccgaaccaacgacccggactcgaccctcacg
tgcgacccgttgcccaatgtgaatatttatctgtccggtagtccaaattgtaggatcgtt
ggtaagaaaggcaaccacgagtggaactttacgatcttcacaacaggtggccaagagtta
cagaacgtggccttgatatccgatgatcatcgagctaacttcttcctaaagtcggtgcaa
gaccagaatggtgcggaaatcggcgtgacaaatggccaggagtggtactgttcctgtccg
gatgaggttcatccccaaaaagataaaaaacaatacctggtgacggtcggtttcaccgcc
gaaaggcacgatacctatcggcaaaatttgatcttcggtttcctgaattgtccgggatat
cttcagaggatctgcgcggactacttggatgctaaagattacgaacgaatacagaaggca
acgatttatcagcagtcacagataccgttaagatggcaggacccgtatcaattctattcg
ccctttatgccgcatgcgaatccgcgggagatcaagctgtcgcggatctacccgtacccg
gacaagcaaaacttcgttctcacccaagacacgttgtcggacagtcgactgacgccacgg
aattatcggggtcgcatgcacgagatgatcaccctcgaggagattgcccggcacgaacag
ctctcaagatataatcagatttcgtggttacgtctcatggcgcattacgtgctattcaac
agcgacggatccaccatcgccaaatacacgccgccgggtgagctcttcgctcagattcca
ctcagtcgggacatcttggaggatacgcagagcggtaggcttctacagcgcagttgtaat
agcgttttcctcaagttatggcggaagaaagcaaagtacgacgtttttgaagctcacatc
gaagacaagagctcgcacttcgtgtacgttcggctgagcaaagagtgcgtaaccttctgg
gacttggaagcgcatagcgagctcgaggtggaagtacgattcgtgttgaaccgcctaaac
ttctgcgagtggcatttggcggtagatagcctcgaggatatggacttggttttcttggtg
aacgaacatcgcaagaccaacgatgagattattggtgacttcctgcaggtagacgccggt
aatcttagtatcttctctagtctacttctggactcgccgctcaatcaggaacaaaagcaa
gcagttaccgcgataacattgtcaatcaaggtcccttcaccaccggttctcctgctaggc
ccattcggcacggggaaaacattcaccatagcgcacatgttacgtatgctcgtgcaaaat
acgaagaataagatacttctgtgcacgcatagcaacagcgccgccgatctttacatcaag
gagttcttccatatctggtacagttcggataagcatcccaggcttaaacctgttaggata
tattacaaattgcgtgctttgaacacggtgcatccggtggtgcagcaatactgcctaatg
gacgaacacggtcgcttccgcgatccggttgcggaagatcttcagaattgcggtctaata
gtgaccacgctggcgacctccagctgcttgatgagtttaaaactatcaccgactcacata
gtcattgacgaagcggcacaggccatggagtgcgaggcattggtagctctgactctggcg
agccgagagactcgcttactcttggcgggcgatcagatgcaactcgcaccggaaatctac
agcgtgctagcgagcgaacgaggactaggcgttagccttctggagagattattcgcgtat
tatccgctggaacatccatgtcgaatacatctatgtcagaactatcgcgcacatgcggac
ataatcaagtatacatccgaaacattttatgacgggatggttaagcccgccaacatgcat
ctcctgaagcatccggttatgaaaccgctgatattttatgctgttaacggtgtagaagaa
caggctacatgttctacgggataccaccatgttacggaggcggaagaggtagcgaatcgc
gtcttggaattgaggagagcatggccgacgcaacagtggggcccatacaacgaaggttcc
atcggagtcttgtcgtattatcctgaacaagtacaacgattgcgaatcgaattacgcaaa
cgcttgctttttgacgtgtctgtcgagagagtgttaaatgtccaaggcaagcaattcacc
gcggttttcatcagtacagtccggacgaggatatcagatagatcatccgccgaggtgaaa
atcaaagattacggttttttaacagatccacgtttgttaaacactgcattgacaagagca
aagtgtttcgtggcagttgtaggcgatccagtcgctctactcactataggttcctgcaaa
gatctttggaagaaatatctggacgtggctgatctatacggaatggaccgaaaagaattg
cagacacatctgaatcaggtttcgaaaatccaaatctcgcctttgaatccgcacgcgagg
gaattttttcccagagcgccgcccttgtgctttgtccaatatattcaagtgccgatttgg
tatccgttaatttatcctccacaacagccaatgtga
DBGET
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