Pogonomyrmex barbatus (red harvester ant): 105431862
Help
Entry
105431862 CDS
T04903
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pbar03036
]
105431862
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pbar00535
]
105431862
Chromosome and associated proteins [BR:
pbar03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
105431862
Meiosis-specific proteins
Cohesin complex and associated proteins
105431862
Proteoglycans [BR:
pbar00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
105431862
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
Motif
Other DBs
NCBI-GeneID:
105431862
NCBI-ProteinID:
XP_011644632
UniProt:
A0A6I9WMJ4
LinkDB
All DBs
Position
Unknown
AA seq
1202 aa
AA seq
DB search
MYIKQVIIQGFKSYREQTVVEPFDPRHNVVVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RQALLHEGTGPRVISAHVEIIFDNSDGRLPIDKDEVYLRRVIGSKKDQYFLNKKIVTRND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSHRLKLLREVAGTRVYDDRREESKSILK
ETEGKLEKIEDFLRTIEERLKTLEEEKEELKEYQRWDKQRRCLEYTIHERELKENKRKLE
ELEESRANSGAEQARLGAEAKTAQEMVRAATKRLKEAKKEVQTAKEERDTLSAEQQQLLK
EKNKLTFTINDLLEEVKGDNDSKKRAQQELEKLKANIALREDELKSLKPEYERMKRVEEE
CTRELQLKEQKRKELYAKQGRGSQFTTKDERDKWIQNELKQLTKQIKDKEEHQKKISEDL
KRDAEKQIALEKKIGDHTREMERQRASIDDHNKQYYELTKAKDQCQATRKEQYRQESVLQ
LNLSGLKEDLAKADQSLRSMAGKPILNGRDSVRKVLDTFRGRKDMVNEVSSYYGPVIENF
NCDKSVYMAVEVTAGNRLFHHIVETDKFGTKILKEMNNQRLPGEVTFMPLNRLHVKDIDY
PQTSDAIPMISKLNYDPKFDKALRYIFGKTLICRNLEAATTLARDSGLDCVTLEGDQVSS
KGSLTGGYFNTLRSRLEIQKTRSELMSQISTLETQLTTLKEEIRKADQNISSYVSEMQRT
ETRNSKAKDIYDKMKAEIRLMKEELSAIERYRTPKERSLAQCTSSLEAMRATKDGLESEL
HQELMAQLSVADQHQVDTLNDDIRRLTKENKEAFAKRMQLEAEKNKLENLLTNNLVRRKD
ELVQALQEISVEDRQRQLDSSKIQLADIEKRLVKVNEDFKAQNEKVTNAMKKQKSESAEV
EKWKLKEKEAQEKIEADAKDLEKLASKLNILQHKIVECTQKITELGALPSHEAYSKFNTM
STKQLFKEMEKANNHLKKYSHVNKKALDQFMSFSDQKERLVKRKEELDRGDEKIKELMSV
LEQRKCEAIQFTFKQVSKYFSEVFKKLVPSGHAQLVMRTADGDEGDDGTAEPSDSDRFIG
VGIKVSFTGHRGEMREMNQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRK
AVADMIHELSSDAQFITTTFRPELLHHANKFYGVKFRNKVSHVECVTREEAADFVEDDTT
HG
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaaacaggtgattatccaaggatttaaatcctaccgtgaacagacggtcgtc
gaacctttcgatccgagacataatgtagtagttggcagaaatgggtctggcaaaagcaac
ttcttttatgctattcaatttgtcctaagcgatgagttctctcatctcaggcctgagcag
aggcaagcactactacatgaaggaacgggacctcgtgttatatctgctcatgtagaaatt
atctttgataattccgatggaagattaccgattgataaagatgaagtatatttaagaaga
gtgattggctccaaaaaggaccaatactttctcaataaaaaaatagtgacaaggaatgat
gtgatgaatttattggaatcagcaggattttctaggtctaatccttactacattgtaaaa
caaggaaagataaatcaaatggcaacagcaccagattcacatagattaaaattattaaga
gaagtagcaggtactagggtatacgacgataggagagaagagtcgaaatccattttgaaa
gagacagagggaaaattagagaaaatcgaggattttctgcgaacaatagaggaacgtttg
aaaacactcgaggaagaaaaagaagaactgaaagaatatcagcgttgggacaaacaacgt
cgatgtttagaatatacgattcacgaacgtgaacttaaagaaaataaaagaaaattagaa
gagctggaggagtctagagcgaatagtggagccgagcaggcgagattgggagcagaagcc
aaaactgctcaagaaatggtacgtgcagctacaaagaggctaaaagaagcaaaaaaggaa
gtacagactgccaaagaagaaagggacactcttagtgctgaacagcagcaattactaaaa
gaaaagaataagttgacttttaccattaacgatttgttggaagaggtaaaaggtgataat
gacagtaaaaaacgtgctcaacaagaattagaaaagttgaaggccaatattgctcttcga
gaagacgagttgaaatctcttaaaccagaatatgaacgaatgaaacgtgttgaggaagag
tgtacacgagaattacaattaaaggagcagaaacgtaaggaattatatgctaaacaaggt
cgtggcagtcaattcaccactaaggatgaaagagacaagtggatacaaaatgagcttaaa
caacttaccaaacagataaaagataaagaagagcatcaaaaaaagatcagcgaagattta
aaacgtgatgcagaaaaacaaattgccttggagaagaaaataggagatcatacgcgtgaa
atggaacgacaacgtgcgtcaatagatgatcataataaacaatattatgagcttaccaaa
gcgaaagatcagtgtcaagcaactcgaaaagaacaatatcggcaggagagtgtattgcaa
ctaaatctatctggtcttaaagaagatttagcaaaagcagatcagagtctaagatccatg
gctggtaaacctattttaaatggcagggatagcgtacgtaaagtattagatactttccgt
ggacggaaagatatggttaatgaagtaagcagttattatgggcctgtaatcgaaaatttc
aactgcgacaagagtgtttatatggccgttgaagtaaccgctgggaatcggttgtttcat
cacattgtggagaccgataagtttggcacaaagattttaaaagaaatgaacaatcaacga
ttgcctggagaagtaacttttatgcctttaaatagacttcacgtcaaagatatagattat
ccgcagacttctgatgctatacccatgatatccaaattaaattacgatcccaaatttgat
aaagcattaagatacatatttggaaagactttgatctgccgcaatctggaggcagcaaca
actttggcgcgagattccggtttggactgtgttacattagaaggcgatcaggtttcatct
aaaggctccttaactggcggatatttcaatacactcagatcacggcttgaaatacagaag
acaagatcagaattaatgtctcagatttctactttggagacccaattaacaacgcttaaa
gaagaaatcagaaaggcggatcaaaatattagttcttacgttagtgaaatgcagaggact
gaaaccagaaatagtaaagctaaagatatatatgataaaatgaaagcagaaatacgtctt
atgaaggaagaattaagtgctatagaaagataccgtacaccaaaagaaagaagtcttgca
cagtgtacatcaagtttggaagcgatgcgcgcgactaaagacggcctggagagtgaatta
catcaagaactcatggcgcagttatccgtcgcggatcagcatcaggttgatactttaaat
gatgacataagacgcttaacgaaggagaacaaagaagcatttgcgaagcgaatgcaatta
gaagcagaaaaaaataagttagaaaacttattaacaaataatttagtgagaagaaaggat
gaattagttcaagctttacaagagatttcagttgaagatcgacaacggcagcttgactca
tcaaagatacaattagcggatattgaaaagagattagtaaaagtaaacgaggatttcaaa
gcgcaaaacgaaaaagtgaccaacgctatgaagaaacaaaaatcggagtctgctgaagtt
gagaaatggaaattaaaagaaaaagaagcacaggagaaaatagaagccgacgcaaaggat
ttagaaaaattagcgagcaagttaaatatcctgcagcataaaatagtggaatgtacacag
aaaattactgaactcggcgcattgcctagtcatgaagcttattctaagtttaatacaatg
tccacgaaacagctttttaaggaaatggagaaagcaaataatcatttaaaaaaatatagc
catgtgaataaaaaggctttggatcagttcatgtcgttcagtgatcagaaagaaagattg
gtaaaacgaaaggaagagttagatcgaggcgacgagaaaataaaagaactcatgtctgta
cttgaacagcgtaaatgcgaagcgatacaatttacatttaaacaggtgagcaaatatttc
agtgaagtatttaaaaaacttgtaccttcgggacatgcgcaattagtcatgaggactgca
gatggtgatgaaggagatgatggaacagcagagccatcagattctgatagattcattggc
gtaggtataaaagtatcgtttacgggacatagaggcgaaatgagagagatgaatcaatta
tctggtggacaaaagtcactcgtagcattggcactcatattcgcgatacaaaagtgcgat
cctgcaccattttatttgttcgatgaaatcgaccaagcgctggacgctcaacacagaaag
gcagtggcagatatgatccacgagcttagctctgatgcccagtttatcaccacgacattc
aggccagaattactacatcatgcgaacaaattttatggagtgaaattcagaaataaagtt
tcgcatgtcgaatgtgtaacgcgggaagaggcagccgatttcgttgaggacgatacaaca
catggttaa
DBGET
integrated database retrieval system