Pogonomyrmex barbatus (red harvester ant): 105431864
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Entry
105431864 CDS
T04903
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03030
DNA replication
pbar03410
Base excision repair
pbar03420
Nucleotide excision repair
pbar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105431864
03410 Base excision repair
105431864
03420 Nucleotide excision repair
105431864
03430 Mismatch repair
105431864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbar03032
]
105431864
03036 Chromosome and associated proteins [BR:
pbar03036
]
105431864
03400 DNA repair and recombination proteins [BR:
pbar03400
]
105431864
DNA replication proteins [BR:
pbar03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105431864
DNA Replication Termination Factors
ELG1-RFC complex
105431864
Chromosome and associated proteins [BR:
pbar03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
105431864
DNA repair and recombination proteins [BR:
pbar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105431864
Check point factors
HRAD17(Rad24)-RFC complex
105431864
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rep_fac_C
AAA_16
Rad17
AAA_22
AAA_11
AAA_14
AAA_30
bpMoxR
RuvB_N
ResIII
DUF815
Mg_chelatase
AAA_24
AAA_7
AAA_19
AAA_assoc_2
AAA_5
AAA_2
NB-ARC
Bac_DnaA
PhoH
nSTAND3
TniB
DNAX_ATPase_lid
SLFN-g3_helicase
AAA_3
AAA_28
RNA_helicase
AAA_29
ATPase_2
Gp44_lid
Motif
Other DBs
NCBI-GeneID:
105431864
NCBI-ProteinID:
XP_011644634
UniProt:
A0A6I9WNI6
LinkDB
All DBs
Position
Unknown
AA seq
327 aa
AA seq
DB search
MHAFLKTGKLGAPTEVKKPSTSRAKGDKKDLTPWVEKYRPKNVDDVVEQTEVVNVIRQAM
EHGDFPNMLFYGPPGTGKTSIIHAAARQMFGNMYKERILELNASDDRGIQVVREKIKSFA
LRRANPNRPDGKKCPPFKIIILDEADSMTGAAQTALRRIMEKESHSTRFCLVCNYLSRII
KPIASRCTKFRFKPLSDEKSIARLEYICNEENLKADKNVLEKIVIASGGDLRQAVMCLQS
ITRLKGKDYEITVDDALDVIGLIPDDHINALWNACEKGSYTEIQKLLENLLLEGYPGSRV
IEQLNEKVIFSDEFTDKQKAMIGDALG
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcacgctttcttgaagactggaaaattgggcgctccgacagaggtgaagaaaccttca
acttctcgggccaaaggtgacaagaaagacttgacaccatgggtggagaaatatcgacca
aaaaatgtcgacgatgtcgtggaacaaacggaagtggtgaatgtaatccgacaagccatg
gaacatggagactttcctaacatgctgttttatggaccaccgggtactggcaagaccagt
atcattcatgcagctgctagacaaatgttcggtaatatgtacaaagagagaatactggaa
ctaaatgcctctgatgatagaggtatccaggtggtgagagagaagatcaaatcctttgca
ttacgtagagctaatcccaatagaccagatgggaagaaatgtccaccatttaaaatcatt
atattggatgaggcagacagtatgaccggtgctgcacaaacggctcttcgtcgaatcatg
gaaaaagaatcacatagtacgcgtttttgcctggtatgcaattatttgtcacgaatcatc
aagccgatagcatcacgttgcaccaagtttcggttcaagccattgagcgatgaaaaaagc
attgccaggctcgagtacatatgcaatgaagaaaatctaaaagctgacaaaaatgtctta
gaaaaaattgttatagcatcgggtggtgatttaagacaggctgtcatgtgtttacaatcg
atcacacggttgaaaggaaaggattatgaaatcactgtggacgatgcactcgacgttatt
ggactgattcctgatgatcatattaacgcattatggaatgcttgtgaaaaggggagttat
actgaaattcaaaaattacttgagaatttgctgctagaaggatatccgggatcacgggta
attgaacaattgaatgaaaaagttattttttctgatgaatttactgacaaacaaaaagcg
atgattggcgacgcacttgggtga
DBGET
integrated database retrieval system
