Pogonomyrmex barbatus (red harvester ant): 105431973
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Entry
105431973 CDS
T04903
Name
(RefSeq) transcription factor Sox-1b-like isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbar03000
]
105431973
Transcription factors [BR:
pbar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
105431973
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
DDHD
TFIIA
Motif
Other DBs
NCBI-GeneID:
105431973
NCBI-ProteinID:
XP_011644818
UniProt:
A0A6I9WRG2
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MHTMETDMKGGNLHGQMPPHPHQGVSPMGHHTGMSAYGSLGSLGVVHSSGLSGSPPGTGV
LSLGLQHHHQAPQHHYASMQAAAVAAAAQQQQQQSMHAMTAQQSAQQQQPQHHPHQQQQQ
QQQSQSQQHHQANNHSNPNNPNNPSNSSNAKNNNMDRVKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLIKKD
KFQLSGGVGGVGGMLGVDQRQVATSGGPQQPQLPRDVYQMPNGYMPNGYMMHDPTAAYQQ
HVAYGSHMGGAAAAAAAASAVGYPRYDSMGHHMGGGSPSPINSYMNGYGGYGGTVPGGSP
SPYHQAQSGSQMSSHSPSGSSIKSEPTSPASGGGIHTPTPTAVPASTGAAGPTGQVVKRE
YMGQQQNQQAVQQQGSDLRQMISMYLPQGVEQGVVQHGSVYSPGPSPDSLAQHHATMQPI
PHMSDSERKMLNPETGCYSESVRAWYQRLEKTGYVTVKYFPRS
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgcacacgatggagacggacatgaagggtggcaatctgcacggtcagatgccaccgcat
ccgcaccagggtgtttcgccgatgggtcatcacacggggatgtccgcttatggctctcta
ggctcgctcggagtagttcatagttcggggctatcgggaagtccacccggcacaggcgtc
ttgagtcttggtcttcaacatcatcatcaggctcctcaacatcattacgcatccatgcag
gcggccgccgtcgctgccgcggctcaacagcaacagcaacaaagtatgcacgcaatgacg
gctcaacagagcgctcagcaacagcagccgcagcatcacccgcatcaacagcagcagcag
cagcagcaatcgcaatcgcagcaacatcatcaagctaataatcatagcaaccctaacaat
ccgaacaaccctagcaactcgtctaacgccaagaataacaatatggaccgcgtcaagaga
cctatgaatgcatttatggtatggtcccgcggacagcgacgcaagatggctcaagagaat
cccaagatgcacaattccgaaatatcgaagcgtctcggcgccgagtggaaacttcttagc
gaggcggagaagcgtccgttcatcgacgaggcgaagcgattgcgcgcggtgcatatgaag
gagcaccccgattacaagtacaggccgcgtcgcaagacaaagacgctgataaagaaggac
aagttccagctgagcggtggcgtcggcggtgtcggcgggatgctcggcgtggatcaacgg
caagtcgccaccagcggtgggccgcagcaaccccaattgccgcgcgatgtctaccagatg
cccaacggctatatgcctaacggttacatgatgcacgatcctacagccgcgtatcagcaa
cacgtcgcgtacggcagtcatatgggaggtgctgcggcagccgccgccgctgcctcggct
gtgggctaccccaggtacgactccatgggccatcacatgggcggcggcagtcccagtcct
attaacagctatatgaatggttacggtggatatggcggtaccgttcccggtggttcaccg
tcaccgtatcaccaggctcaatcgggttctcagatgtccagtcatagtcctagtggcagc
agtataaaatccgaaccgacgagcccggcgagcggcggtggcatacatacgccaacgccg
acggccgtcccggcgtcaacgggcgcggctgggcccactggtcaggtcgtcaaacgggag
tacatgggccaacagcagaaccaacaagcggtgcagcagcagggcagcgatctcaggcag
atgatctcgatgtacctgccgcagggcgttgagcaaggagtcgtgcaacacggaagcgtc
tactcgccgggtccgtcgcccgattctttggcgcaacatcacgctaccatgcagccaatc
ccacacatgtcagatagcgagcgtaagatgttgaacccggaaactggctgctactccgaa
tccgtacgagcatggtatcagcgcctggagaaaacgggatacgtgactgtgaaatatttc
ccaagatcgtga
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integrated database retrieval system
