Pogonomyrmex barbatus (red harvester ant): 105432069
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Entry
105432069 CDS
T04903
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105432069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbar03019
]
105432069
03036 Chromosome and associated proteins [BR:
pbar03036
]
105432069
Messenger RNA biogenesis [BR:
pbar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105432069
Chromosome and associated proteins [BR:
pbar03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105432069
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
105432069
NCBI-ProteinID:
XP_011644976
LinkDB
All DBs
Position
Unknown
AA seq
1913 aa
AA seq
DB search
MFGQTGNTSFSGFSTATQNSPFGQSAFGKPITTTSFGSGATPVFGSSNTSSLFSSKPTGS
TTGGLFGNTTTPPAFRQPTNTQPSFGGFGTTNTSTNLFGTQQNAGTNLFGTSTGTSAFGQ
ANKPGFNFGTTSGTNLFGQPQQNTQQTTPFGQANTTPNTNLFGSTTGFGNTNTTTVPTGT
VVKFTPLITTDSMSKNGISHSISARHCCIASMKEYESKSYEELRFEDYQVGRKGPQTGLF
GSSTQTPFGSTSAGTSTAGTGFGSMTGGFGTTSQSGSTGLFGKPITNFGTPATTTTNSFA
FNTPTTNLFGTNTQTKPFGTAPTPLFGNSSTNQTAGTGFGINTGQNTGFGSAFGSTQPNQ
SIGLFNQNKSAFNIPSTSTSTGFTSFGQPATNTTTPLFGNKTTTTGFGTTSTFGTAAPST
FGTNTGFNSASNTGSSLFNSSFKPAGQTSGFSFGTTSASSTGLGTNTGLNLGGGSSLFGQ
QKPGSLFGNTANNTTFNNPGTFGSSTFGTGSNMMSGTGMGLLNGGVASNQAKTNGSVPVH
QQILALVSAPFGDSPLLKNLLPASGKAEELLKPTNPTSKVLNSPQYRVTANNKSPKIKTR
VVSSAQLSKKSLFDGLEEEDPVITEAFQPRPSAKRLVLRPKSATNSSVDSPAENGESNGM
TRNGITDDRADTSDVIHSNNIEVNDKENHSQDNNRLSNDRRSSTSWLKSTLPRKNKIYES
NDELLEGQRSPFSGTNVPEEVNNTVAEFRSPNNSSNTNHSETINLTEVPLNSTFDDRNSV
NLSMPNAESSQETDDGSFSMLQSNWSMNMAKVTLRRAGYYTIPSLDKLDDFVCGETCIVP
NFTIGREGYGNVYFPDSFDIYGLNLDEIVHFRNKEVIIYPDDEKKPPVGQGLNRRAQVTL
DKVWPHDKSLHEPITDPQRLAAMNYEGKLRRVSAKHDTRFLEYRPETGSWVFKVDHFSKY
GLSDSDEDDNQIPPNSEVKKLKGFPASLQKGKSVDPSTATNKEAINGTINGTLGDTKIVN
GKHPNVESNFLGKTPISRFAYNDQSYEERGMSPSXESSFSRASYTPGDYSYEKRMTVSPI
GDNARVAGTDSHKLQLMKASFFDMHDEDMSEETSNDIFPSVQKTLIRYFPDVNETKNDEA
SYNAMMLRSTLATNETLFSACPENTLYTSSKKSHLSRTSVKDKQPIIERTILPRMATPVT
SVLKYHYEVVPLEESRLNKLRFRCIADTGIYMGRMFRPSWGAGLTLLSLSTQDQATKMQL
RNTFSQLSCYVSGRFIDDITSTVIVQRLQILGGDEHDAKSFKDSIERHLRIQLDHCVMGQ
EGDCPTFDVATDTANEALQLHCTLAQDLVEKEQRPNEDANDEQSLCSSAAERSFRQYASI
VWTLCVALWGNIDQEAINNTNEKHYNVMMRREAVGDWLKNVVQKTVEREIKSVDSIETRN
FHEKIILSLLSACKLEEACQEARKAGDHCLALLMAQLRSGESIKKLIKQQLALWQETDVD
ENLTIDRLKLFMLIAGVPLISSKHGTINVCEDLDWKRAFAIHLWYLSPPTCSITDALDLY
EASFDTTEAEAYAAVPEPEYKENDYDAELTNGKRIHDLCFHLLKLYCTGNHDLGELLNPL
SYTANPLDYRLSWLVQQTLVALGYTHLSDHVAALTHTNFASQLEAHGLWHWAIFVVLHLR
DSSRRRTAVQDLLLRHIEIDDTPEYTKREQFLKEELGISSVWIYQAKAIKSSINKRHGEA
AWYYIQAEQWTQAHEIIIEHLAADAIINENYEYLKSLLSPLVECSGTISGWSHQGELLWE
YMEITNEVKKLLKSAPDYCGLTYQMEALKPRLTGLCQKIDQFPCPTAKHRLCQAEIAKRS
LHLTRNMLLLQKNEQRSVTKLLIRLISQLPLPEDYAQQELRPIVNTRVTEVMP
NT seq
5742 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggcaaactggaaatacatcgttcagtggatttagtacagcaacacaaaatagt
ccatttggccaatctgcatttggcaaacccattactacaacaagttttggtagtggcgca
acacctgtctttggtagtagcaatacttcatcactctttagttctaagcccacaggttct
actacaggtggcttgtttggaaataccacaacgccaccagcatttagacagcccactaat
acgcaaccgtcttttggaggctttgggacaacaaatacaagcactaatcttttcggcact
caacaaaatgctggtacaaacctttttggcacaagtacaggaacttcggcatttggtcaa
gcgaataaacctggttttaatttcggcacgacatctggaaccaatttgtttggacaacca
caacagaatacacaacaaactactccgttcggtcaagccaatactaccccaaatacaaat
ctttttggttcaactacaggttttggcaatactaacaccaccactgtaccaactggtact
gtagtaaaatttacacctctcattacaaccgattctatgtccaaaaatggaatatcacat
agtatttcggcccgtcattgttgcattgcatctatgaaagaatatgaatcaaaatcatac
gaagaattgcgcttcgaagattatcaagttggaagaaagggtccacaaacaggacttttt
ggatcgtcaacgcaaacaccatttggtagtacatcagctggtactagtacagctggaact
ggttttggatcaatgaccggaggatttggtaccaccagccaatcaggatcaactggatta
tttggaaagcccattaccaattttggaacaccagctaccacaacaaccaacagttttgca
ttcaatacacctactacaaatttgtttggtactaatactcaaacaaaaccatttggtact
gccccgacaccgctttttggcaatagtagtactaatcaaactgcaggaacaggttttggt
attaatactggacagaatacaggatttggatctgcatttggttccacacaacctaatcag
agtattggactgtttaatcagaacaaatctgcttttaatatcccatcgacgtcgactagt
actggcttcactagctttggtcaaccagcaacaaatactactacaccgttgtttggtaat
aaaactactaccactggatttggaacaacatctacatttggtactgctgcaccttccaca
tttggaactaatacaggtttcaattcggcttccaataccggatcgtcattgtttaattcg
tcatttaaaccagctgggcaaacatcaggattttcctttgggactacatctgcgtcttct
actggacttggtacaaatactggattaaacttgggcggcggttcttcattgtttgggcaa
caaaagccgggtagtttgtttggaaataccgcaaataatacaacatttaataatcctgga
acatttggatcttctacttttggaacaggctctaatatgatgtctggaacaggaatgggc
ttgcttaatggaggagtggcatcgaatcaagctaaaacgaatggttctgtaccagtgcat
caacaaattttggctctcgtttctgcaccatttggcgattcaccattattgaagaatctt
ttaccagcatctggaaaagctgaagaactcttaaagcccacaaatccaacctcaaaagta
ttaaacagtccgcaatacagagttaccgccaataacaaatctccaaaaatcaaaacaaga
gtcgtcagttctgcacagttatctaaaaaatctttgtttgatggtcttgaagaagaagat
cccgtgataaccgaagctttccaacctcggccaagtgcaaaacgtttggtgttacgacca
aagtctgcgacaaattcctcagttgattctcccgctgaaaacggagaatcaaacggaatg
acaagaaatggtatcactgatgatagggccgatacatcagatgtaatacacagtaacaat
attgaagtgaacgataaagaaaatcacagccaagacaataatcgactttccaatgatcga
cgatcatctacatcttggttgaagtcgacacttccgcgaaagaataaaatttatgagtcg
aacgatgaattgcttgaggggcagcgatcacccttttctggaacaaatgtacccgaggaa
gtaaataatacggtggccgaatttagatcgccaaacaattcgtcaaatacgaatcattca
gaaacgattaatttgaccgaagtcccactgaactctacttttgatgatagaaattccgtg
aatctttctatgccaaatgcagaatccagtcaagaaacagacgatggttcattctcgatg
ttacaatctaattggagtatgaacatggccaaagttacattacgacgagcaggttactac
actattccgtcgctcgataaactagacgattttgtctgcggcgaaacctgcatcgtacca
aattttacaatcggccgcgagggttatggcaatgtatactttccggattcgtttgatata
tatggcttgaatctcgatgaaatagtacacttccgtaataaagaggtaattatttatccc
gacgatgagaagaaaccaccggtgggacaaggtttgaaccgaagggcacaggtcactctg
gacaaagtgtggccacacgacaagtcgctgcacgagccgattacagatccacaacgactc
gctgcaatgaactatgaaggcaaattacgccgagtatccgcgaagcatgatactcgtttc
ctcgagtatcgaccagaaactggctcgtgggtcttcaaagtcgaccacttctccaagtac
ggtcttagtgattcagacgaggatgacaatcagattccgcctaattcggaagtaaagaaa
ctgaaaggatttcccgcatctctgcaaaagggcaagtctgttgatccatctactgcaacg
aataaggaagcaatcaatggaacgattaatggaacgctcggcgatacgaaaatcgtaaac
ggcaagcatccaaatgttgagagcaattttttaggaaaaactccaatcagccgcttcgcc
tacaacgatcagagttatgaggaacgaggaatgagtccctcgngggaaagttcatttagc
cgtgctagttatacacccggggattacagttacgaaaagcgaatgactgttagtccgatc
ggcgataatgcccgagtcgctggtacagacagtcataaattgcagctcatgaaagcaagc
ttttttgacatgcacgacgaggatatgagcgaggaaacgagcaacgacatattcccctcc
gtacagaaaactttgatacgttattttccagatgttaacgagaccaagaacgatgaagct
tcgtacaacgctatgatgttgcgatcgactcttgccacaaacgaaacgttgttttctgca
tgtccggaaaacacgctttatacatcgagcaagaagtcgcatttatcgcgtaccagcgtg
aaggataaacagccaattattgaaagaacgatcctaccacgtatggccaccccagtaacg
agtgttttgaaatatcattacgaagtcgtaccgcttgaagaatccagattgaacaagttg
cgatttcgttgtatcgccgacactggtatctacatgggcaggatgtttcgaccaagttgg
ggtgctggtttgacattgctgtctttaagcactcaagatcaggcaactaaaatgcaactg
cgaaacacattcagtcaactgagttgttatgtgtccggtcgttttatcgacgacatcacg
tcgacggtgatcgttcaacgtctgcagatcctaggtggcgacgagcacgacgcgaaatca
ttcaaggacagtatagaacgtcacttgagaattcagctggatcattgtgtgatgggtcaa
gagggagactgtcctacgttcgatgtagcaaccgataccgcgaacgaagcattgcaattg
cattgcactttggcgcaggatctcgtggaaaaggaacagagaccgaacgaggatgccaac
gacgagcaatcactctgcagtagtgccgctgaaagatcatttcgtcaatacgcaagtatt
gtgtggaccctctgcgtggcactctggggaaatatcgatcaggaagcaatcaataatacc
aatgaaaaacattataacgttatgatgaggagagaggctgtaggtgactggttgaagaat
gtagtgcagaagacggttgagagagagatcaaaagcgttgacagcattgagactagaaac
tttcatgagaagataatattgtcgctgctttctgcttgtaagctggaggaagcttgccaa
gaagcgcgaaaggctggggatcattgtctggcgttactgatggcgcaactgcggagcggc
gaatcaatcaagaaactgatcaagcagcaacttgccttatggcaagagaccgatgtggat
gaaaatctcacgatcgatcgtctgaagctgttcatgctaattgcgggagtgccactcatc
tctagcaaacacggcactatcaatgtgtgcgaggatttggactggaaacgggctttcgct
atccatctgtggtacttatcgccaccgacttgctcgatcaccgatgccttggacctttat
gaagcatccttcgatacaacggaggctgaagcgtacgcggcagttccggaacccgaatat
aaggagaatgactatgacgccgagttgactaatggcaagcggatacacgatctctgcttc
catcttttgaaattatattgcacaggaaatcatgatttaggcgaacttttaaatccacta
tcgtacaccgctaatcctttggattatagattgagttggttggtgcaacaaacgctcgta
gccttgggttacacgcatctctccgatcacgttgccgcattaacacatacaaactttgcg
agtcaattggaggcacacggactgtggcactgggcgatctttgtagtattacatttacga
gactcctctagacgacgaactgctgtacaagatctactgttacgtcacatagaaatagac
gataccccggaatatacgaaacgtgaacaatttttgaaggaagagcttggtatatcatca
gtttggatctatcaagctaaagccattaaaagtagcattaacaagaggcatggcgaagca
gcttggtattacatccaggcggaacaatggactcaggcccatgaaattattatagaacat
ctggcagctgatgctataataaatgaaaattatgaatatttaaaatcattattgagtccg
ctagtcgaatgtagtggcacaattagtggatggtcgcatcaaggagagctcttgtgggaa
tacatggaaataaccaacgaggttaagaagctattaaaatctgctccggattactgtgga
ttaacttatcaaatggaagcgctgaaacctcgattaacgggcttgtgtcagaagattgat
caatttccatgcccaactgctaaacatagattatgccaggctgaaattgcaaagagaagt
ctacacttgactaggaatatgctgctactacagaaaaacgagcaaagatccgtcacaaag
ttgttaattcgtctaatatctcagctacccttaccagaagattacgcgcagcaggagctt
cgacctatcgttaatacacgtgtgacagaagtaatgccctaa
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integrated database retrieval system
