Pogonomyrmex barbatus (red harvester ant): 105432083
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Entry
105432083 CDS
T04903
Name
(RefSeq) DEAD-box helicase Dbp80
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03013
Nucleocytoplasmic transport
pbar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105432083
03015 mRNA surveillance pathway
105432083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbar03019
]
105432083
Enzymes [BR:
pbar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105432083
Messenger RNA biogenesis [BR:
pbar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105432083
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
105432083
NCBI-ProteinID:
XP_011645005
UniProt:
A0A6I9WNB9
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MASTKVDWGQYTDEQDKLVSKVTDLNLDKPKQTSIPASSIKDGDPKSDDDTSEEQISPAE
KSLLQKIIRKGLVETTKDIEVQRKDPNSPLFSVKTFDALHLKPALLKGVYAMGFNAPSRI
QETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDVTKEYPQVLCLSPTYELAIQT
GEVAAKMSRFCPEIKIKYAVRGEEISRGSKITEHIIIGTPGKVLDWGQKFKFFDLSKISV
FVLDEADVMIATQGHQDQCIRIHKLLPRTCQMMFFSATYEPEVMNFAEIIVSNPLIIRLL
REEESLDNIKQYYIKCENIDEKYAAITNIYGVITIGQAIIFCHTKKTASWLAEKMSKDGH
AVAILSGDLTVEQRISVLDRFRAGLEKVLITTNVLARGIDVEQVTIVVNFDLPMDQKRQA
DCETYLHRIGRTGRFGKSGIAINLIDSPHAMQLCKDIERHFGKKIHYLDAEDADEIEKIG
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaactaaagtcgattggggacaatacaccgatgaacaagacaaattggtatca
aaggtgacagatttgaacttggataaaccaaagcagacatccatacctgcttcgtccatt
aaagatggagatccgaagagtgatgatgatacatctgaggagcaaatctcaccagcggag
aaatcactcttacaaaaaattataaggaaaggattagtggaaacgacgaaagatatagag
gttcaaagaaaggacccaaattctccattatttagcgtcaaaacttttgacgcacttcat
ctcaaacctgccttattaaaaggagtttatgctatgggatttaacgcaccatcaagaatt
caagaaactgctttacctactctacttgccgatccaccacagaatatgattgcacagtct
caatctggtacgggtaaaacagctgcattcgttctcgccatgttgagtcgagtagatgta
acaaaggaatatccacaagtactttgtttatcaccaacttatgaactagcaattcaaacc
ggtgaagtagcagcaaagatgtcgcgcttctgtcccgagataaaaataaagtacgctgta
agaggagaagaaataagccgtggatcaaagatcacggaacatattattataggaactcca
ggtaaagtgttagattgggggcaaaaattcaaattctttgatttaagcaagatatctgta
tttgtgttggacgaagcagacgttatgattgctacacagggtcatcaagatcaatgtatt
cgtatccacaaattactgccacgtacatgtcagatgatgttcttctctgcgacgtatgag
cctgaagtgatgaactttgcagagattatagtcagtaatccactaataatacggttatta
agagaagaagagagtttagataatattaaacaatattatatcaaatgcgaaaatatagac
gaaaaatatgcagctatcactaatatctacggcgtgattactatcggacaggcgattatc
ttttgtcatacaaagaagacagctagttggttggcagaaaaaatgtcgaaagacggacac
gcggtagcaatattatctggtgacttgacagtggaacagaggatttctgtattggacaga
tttagagcagggcttgaaaaagttcttatcactacgaatgttttagctagaggcattgat
gtggaacaggtgacgatagtagtcaatttcgatctgccgatggaccaaaagcgacaagct
gattgtgagacatacttgcatagaatcggaagaacggggcgatttggcaagtcaggaatt
gccatcaatttgatcgactcgccgcatgcgatgcaattgtgcaaagatatagagagacat
tttggcaagaaaatccattacctcgacgcggaggatgcggatgaaattgaaaaaatcgga
gcttaa
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