Pogonomyrmex barbatus (red harvester ant): 105432137
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Entry
105432137 CDS
T04903
Name
(RefSeq) polypyrimidine tract-binding protein 1 isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbar03019
]
105432137
03041 Spliceosome [BR:
pbar03041
]
105432137
Messenger RNA biogenesis [BR:
pbar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
105432137
Spliceosome [BR:
pbar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
105432137
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
105432137
NCBI-ProteinID:
XP_011645096
UniProt:
A0A6I9WPM9
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MMMTNLPPVMLPPITDYGMLAPTLGIKVRIPDLSNFRPFPTAPFPVVSVQEFQYARGTGA
SLTMRGSDELLSQSGAVSNGASMSPQPHHAADNNNDAKKVKLDKSHSGKPSRVIHIRNIP
NEVTEAEIIHLGLPFGRVTNVLVLKGKNQAFLEMADENAAATMVTYYASGVAQLRGRAVY
VQFSNHRELKTDQTHSNNAVSSPTNDVANTSENSNNQVAIAGQNQVTGAGETQGGPNTVL
RVVVEHLVYPITLDILYQIFTRFGKVLKIVTFTKNSCYQALIQYADMLSAQTAKFSLDGQ
NVYNSCCTLRIEYSKMQNLNVKYNNDKSRDYTNPNLPTGDANLDAASLALGGELLLMGAG
SQPRARIPVESIAGAPGVLPTPFAMHGLASPLAGPYNGVPPAGGLAGLGGFPLGAAGLGV
RVQGSAQASSVLLVSNLNEEMVTPDALFTLFGVYGDVQRVKILYNKKDSALIQMAEPHQA
LLALTHMDKLRVFGKQIKVMLSKHQTVQLPKEGQPDAGLTKDYTNSTLHRFKKPGSKNYQ
NIYPPSATLHLSNIPATVAEEEIKDAFTKNGFTVKAFKFFPKDRKMALIQMPNMDDAVAA
LIKMHNYQLSESNHLRVSFSKSNI
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgacaaacctaccccctgttatgctgccacctattacggactacgggatgttg
gcacctactcttggaataaaggtaagaattccagacctttcgaattttcgtccgttcccc
acagcaccgttcccggtggtgagtgtccaggaattccagtacgcacgcgggacgggcgcg
tccctgacgatgaggggtagtgacgagcttctatcgcaaagcggggcagtcagcaatggt
gcttcaatgagtccgcaacctcatcacgcagccgacaacaacaatgatgccaagaaggtt
aagctcgacaagagtcacagcggcaaaccttccagagtcattcatatcaggaacatacct
aacgaggtgacagaggcagagatcatccatctgggcctgcccttcggtcgtgttaccaat
gtactcgttctcaaaggcaaaaatcaggcatttcttgaaatggcggacgagaacgctgcg
gcgaccatggtgacctactatgcttccggcgtggcccaactcagaggcagagcggtctac
gtgcagttcagcaatcatcgtgaactcaagacggatcaaacgcactccaacaacgcggtc
agtagcccaacaaatgatgtcgccaacacttctgagaactcgaacaaccaggtcgcgatc
gccggacaaaatcaggtgacaggtgctggcgagactcagggcggacccaacaccgtactc
cgagtcgtcgtggagcacctggtttacccgattactctcgacatcctctaccagatattc
acgcgattcggcaaggttctaaagatcgtcaccttcacaaagaacagctgctaccaggca
ctaatacagtacgcggacatgttgtcggcgcagaccgctaaattctcgctggacgggcag
aatgtctacaattcctgctgtacgctgcgcatcgaatatagcaaaatgcagaacctcaat
gtcaagtacaacaatgacaaatctcgtgactacaccaacccgaatcttccaaccggtgac
gccaatctggatgctgcgtcgctcgctctcggcggcgaattgctgctcatgggcgccggc
tcccaaccgcgtgccagaatacccgtagagtccattgcaggggcaccgggtgtgctgccc
acgccctttgccatgcacggccttgcctcccctttggctggtccctacaacggcgtgccc
ccggccggcgggctcgctggtctcggcggatttcctcttggcgcggctggtttaggggtt
cgagtacaagggagtgcacaggcatcgtccgtgctgttggtcagcaatctcaacgaagag
atggtcacgcctgacgctctctttaccctgtttggcgtttacggggatgtacagcgtgtg
aagatcctctacaacaagaaagattcagcactaatacagatggcagaacctcatcaggca
cttttagcgcttacccatatggacaagttacgggtgtttggaaagcaaattaaagtaatg
ctcagcaaacaccaaacggtccaattgccaaaagaaggtcagccagacgcgggcctcacg
aaagattacacaaacagcactcttcaccgattcaagaagcccggctcgaaaaattatcag
aatatttatccgccaagtgcgaccttgcatttatcgaacattccagctacggtagcggag
gaagagatcaaggatgctttcaccaagaatggtttcaccgtgaaagctttcaagttcttc
ccgaaggacagaaagatggctctcatacaaatgcctaacatggatgatgccgtggctgcg
ctgattaaaatgcacaactatcaacttagcgagtccaaccacctcagagtatcgttctcc
aagagcaacatctaa
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