Pogonomyrmex barbatus (red harvester ant): 105432207
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Entry
105432207 CDS
T04903
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105432207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbar03019
]
105432207
Messenger RNA biogenesis [BR:
pbar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105432207
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
105432207
NCBI-ProteinID:
XP_011645207
UniProt:
A0A6I9XI05
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MIDTDKKGCRELLMQRMILAIVTSITLQLFLICCLVPFTNLSMDYARWLEETWHIITSPR
MWAYFIVLAMVTILQGFFCSKRYLHPLPYYKSRFAKLRTTFTFQSLLLRVLYIVIGGILV
WLHLSLKRGSYNSSTADYSIEYGSHLVEEHYFLLFSGLWSGLYFFIKTGDSSRKYFQFPI
IAQYKFFRIRQRIISMFPTLIISSMWSTLYYMTIYYFIRAYCHEAFLSVVSIHMESNPLN
TISRLLNLSLISQLWLHQFIFIFIITNTYILFEIYLTEWTQFKFGLSGAYNVDSSEMTLI
DGLSMDKIPIMQHLAYLDLVTLAQKEKMRRGTLFTLSQPGGHPYNWNCVVQKCTNLLNKF
SSDLNAISIKSQDKLFCHSASILTTKGPPARQSKYIYHMRKLVPDVIPATTLPMEADTMA
PYSGPFIQKYIKQKKEAFIAYLLSKPLINYIFGEQDDNKIRYVLHNGQLMIWATEAISSL
TVFSLIEDSYGIVQKDVPTIINALLSVKQALDKLQKSAVLARKMLMDDKLIKEIFTSLRS
AIKRSLYRIVTNFEPYINDLSLEPSTIEQLQSFLNYKE
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacactgataaaaagggctgcagggaactgctaatgcagcgaatgatcttggcc
attgtcacaagcataacgttgcaattatttctcatttgttgcctcgtcccgttcacgaat
ctgagcatggattatgcacgctggcttgaagaaacgtggcacatcataacgtcaccacga
atgtgggcttacttcattgttcttgccatggtgaccatcctgcaaggttttttttgcagc
aagagatatctgcatccactaccatattacaaaagcagattcgctaagctgcgtacaacc
ttcacgtttcaaagtttgcttctgcgagtgttgtacattgtcattggtggtattctggtc
tggctgcatttgtcattgaagagaggaagctacaattcttcgactgcggactacagcatc
gaatatggatcacatctagtagaagaacactactttttgctgtttagtggtttatggagt
ggattgtatttctttatcaagactggtgattccagtagaaaatatttccagtttcccatc
atagcacaatacaagttcttccgaataagacaaagaatcatttccatgtttccaacactg
ataatttcttctatgtggtcgactctatattacatgacaatttattattttataagggca
tattgtcatgaagcattcttatctgttgtttctatacacatggagagcaatcctttgaat
actatatctagattgctaaatttgtcgctgatatcacaactgtggcttcatcagtttata
tttatatttataataactaacacatatatattatttgagatatatctgactgaatggact
cagtttaaatttggcttgagtggcgcatacaatgttgatagttcagaaatgactcttatt
gatggtctgtcaatggataagataccgataatgcagcacttggcatacttagatctggtc
accttagcacaaaaggaaaaaatgagaagaggtacattgtttacactcagccagccaggt
ggtcatccatacaattggaattgcgtagtgcaaaagtgtacaaatcttctcaataaattc
tcgtcagatctcaatgcaatatctataaaatctcaagataaattattctgccacagtgca
agcatattgacaacgaaaggtccaccagctcgacaaagcaaatatatttatcatatgcgg
aaattggtaccagatgtaataccagcaacaaccttaccaatggaagcagatacaatggct
ccttacagtggtccatttattcaaaaatatataaaacagaaaaaggaagctttcatagca
tatttgctctctaagccacttattaattatatttttggcgaacaagacgataataagatt
cgttatgtcttacataatggtcaattaatgatctgggcaaccgaagctatttcatcttta
actgtcttttcactgatcgaagattcttatggtattgtacaaaaagatgtgccaacgatt
atcaacgctttgttatcagtgaagcaggcgctagacaaactgcaaaagtcagctgtatta
gcaaggaaaatgctaatggatgataaattgattaaggaaatttttacatctctacgaagt
gcgattaagcgtagtttgtatagaattgttacaaattttgagccttatatcaatgattta
tctcttgagccttcaacgatagaacaactgcaaagtttcctcaattataaagaatag
DBGET
integrated database retrieval system
