Pogonomyrmex barbatus (red harvester ant): 105432287
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Entry
105432287 CDS
T04903
Name
(RefSeq) DNA repair and recombination protein RAD54B-like
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105432287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbar03400
]
105432287
DNA repair and recombination proteins [BR:
pbar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
105432287
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ZGRF1-like_N
ResIII
Motif
Other DBs
NCBI-GeneID:
105432287
NCBI-ProteinID:
XP_011645329
LinkDB
All DBs
Position
Unknown
AA seq
1033 aa
AA seq
DB search
NCSRRQLKKVRSDTIIFRWKTIYRENEKPVFQYAKIHLLTCPKRQQKITFNVVYGKITSK
KHKIWDGDGFLEIIGKNAILKDLDGNTMGRTMINFSNVTEGSKLIIGNKQIEIVDQMLQD
LPILEKNSKEIIEEPLQKKFKSSTRFVSKDDNTELYEKKESTSSPETKIKTIFNVIYGKV
SSKKHKTWDDDGFLEIIGKSAILKDLDDNIIGKITINPNNVMKGSKLIIGNKQIEIIDQM
QDLFILDKNSEAIEEPLQKNFKTFTRLAKEDNNAELYKEEKSTNSPETKIKTIFNVMYGK
ISSKKHKTWDGDGLLEVTGKSGILKDLDGNIMGRTIINSSTVAEGFKLIIGNKQIEIINQ
LSQEQYVPENNIEKMVEESRKKVKVSIAQAFTSLQSSAKALNTEPLVMPYLNSAELISQE
EHEVSVDSCLVTKLREHQRYGIVFLYECLMGLKVPDHFGAILADEMGLGKTLQCITLIWT
MLKKGPYGRPIVKRVLIITPSSLCSNWEKEFVKWLGSHRIFLYIVNGKNRPKDFIKYPRN
SVMIISYEMFIKCHIEIDEIAFDLIVCDEGHRLKNSNVKAAKLLREINCKKRIILTGTPI
QNDLKEFYVLIDLVNPGILGTSAEYKNYYENPIVASQCPYANDDVVSLGTQRSTELYERT
KSFILRRTQRTINKYLPHKYEIVLFCSLSDKQKDLYSLVTDVWFNKICIEDKSNIHLTII
TALKKICNHPNLFLNNKENTLYNALLKTSCISQMKYDENFTKYCGKVTILQILMRNLKKT
DEKLVLVSYYTQTLDLLETICNIERLKFLRLDGATSSSARSKITEKFNTRTDNSRVLLLS
AKAGGVGLNLPGASRLVLFDSDWNPASDIQAMSRIWRDGQKRDVYIYRLLTTGTIEEKIY
QRQISKANLSEAVMDLNHLGSLKLSAEELKNLFTLANDTISLTHDLMNCSCFDSNESLEK
LKEVKSNEKKLKSNETRDCQFMLYNKSHKNLTINQLQDWQHYKQPIPSDILQDIMLTEAK
DNITFIFKNSTMQ
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
aattgttcgagaaggcaactcaagaaagtgagatcggacacaataattttcaggtggaaa
acgatttatcgagaaaacgagaagccagtgtttcagtatgccaaaatacatctgctgact
tgtccgaaacgacagcaaaaaattacttttaatgtagtatatggcaaaataacttcgaaa
aaacacaaaatatgggacggagatggttttttagagataattggcaagaatgcaattctt
aaggatttagatggcaataccatgggaagaactatgatcaatttcagcaatgtgacagaa
ggctctaagttaattataggaaataaacaaattgaaattgtagatcaaatgttgcaagat
ttacctatattagaaaaaaattctaaagaaataatagaggaaccactacaaaaaaaattc
aaatcatctactagatttgtatcaaaagatgacaacactgaattgtacgagaaaaaagaa
tcaactagttcacctgagacaaaaataaaaaccatattcaatgtgatatatggtaaagta
tcttcaaagaaacataaaacatgggatgatgatggtttcttagaaataattggcaaaagt
gcgattcttaaggatttggatgacaatattataggaaaaattacaattaatcctaataat
gtgatgaaaggttctaaattaattataggaaacaaacaaattgaaattatagatcagatg
caagatttgtttatattagacaaaaattccgaggcaatagaagaaccactacaaaaaaat
tttaaaacatttactagacttgcaaaagaagataacaatgctgaattgtacaaggaagaa
aaatcaaccaattcacctgagacaaagataaaaactatattcaatgtgatgtatggcaaa
atatcttcgaagaagcacaaaacatgggatggcgatggtttgctagaagttactggaaaa
agcggaattcttaaggacttggatggtaacattatgggaagaactataatcaattcaagc
actgtagcagaaggctttaaattaattataggaaacaaacaaatagagattataaatcag
ttatcccaagaacaatatgtaccagagaataatatcgagaaaatggtagaggaatcaaga
aagaaagttaaagtatctattgcacaagcatttacgtcgttgcaatcatctgcaaaagca
ttgaataccgagcctttagtgatgccttatttgaattctgctgaattgataagtcaagag
gagcatgaagtctcagtggattcttgtttagtgacaaagcttcgagaacatcagcgttat
ggaatagtgtttctttatgaatgcttaatgggattaaaagtgccagatcactttggtgca
attttggccgatgaaatgggcctcggtaaaactttacaatgcattacgttaatttggacg
atgttgaaaaaaggcccatatggaagaccgattgtgaaacgtgtgttaataataacacct
agtagcttgtgcagcaactgggaaaaagaatttgtgaaatggttgggttcccataggata
tttctttatattgtgaatggaaaaaatagacccaaggattttatcaaatatccgaggaat
tcagtaatgattattagttatgaaatgttcatcaaatgtcatatagagattgatgaaatc
gctttcgatttgattgtgtgcgatgaaggccatagattgaaaaatagcaatgtaaaagca
gcaaaactgttacgtgagattaattgtaaaaaacgaattatcttaacgggcactcctata
cagaatgatctgaaggaattttatgtgctgatcgatttagttaatcctggcattcttggc
acttctgctgaatacaagaattattatgagaatcctattgtcgcttctcagtgcccttat
gctaatgatgatgttgtcagtttgggaactcaaagatctacggaattatacgaacgcacc
aaatcttttattttgcgccgtacacaaagaacgataaataaatatctgccgcataaatat
gaaatagtcttattctgttctttatctgacaagcaaaaagatttgtattctcttgtgact
gatgtttggttcaacaaaatttgtatagaagacaaaagtaatatacatttgactatcatt
actgctctaaaaaaaatttgtaatcatccaaacctgttcttaaataataaagaaaacaca
ttatataatgctttgttaaagacatcatgtatatcacagatgaaatatgacgaaaatttt
accaagtattgcgggaaagtcacaattctacagatactaatgagaaatttgaaaaagact
gatgaaaagttagtgttagtctcttattacacacaaacgcttgatcttcttgagactata
tgcaatatagaaagattaaaattcttaagattagacggcgctacttcaagttctgcacga
tcaaaaattactgaaaaatttaatacacgaactgataatagcagagttcttttgttaagt
gcaaaggcgggtggtgttggtctgaatttacctggagcatctagacttgtattatttgat
tctgattggaatcctgcatctgatatacaagcaatgtcaaggatttggagagatgggcag
aagagagatgtttatatctatagattattgactacaggtacaatagaagaaaagatatat
caaagacaaattagtaaagctaatctgagtgaggctgtgatggatttgaatcatcttgga
tctctaaaattatcagctgaagaactaaagaatttatttacattggcaaatgatacaatc
tcattaacacatgatttgatgaattgttcttgtttcgacagtaatgaatctttggaaaaa
ttgaaagaagtgaaaagtaatgagaaaaaattgaaaagtaatgagacgcgcgattgtcaa
tttatgctgtataacaaatctcataaaaatttaactataaatcagcttcaagattggcaa
cattataagcaacctattccatctgacattttacaggacattatgttaacagaggcaaaa
gataatataacatttatatttaaaaattctacaatgcaataa
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