Pogonomyrmex barbatus (red harvester ant): 105432311
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Entry
105432311 CDS
T04903
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105432311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pbar04131
]
105432311
Membrane trafficking [BR:
pbar04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
105432311
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
DUF3896
FerA
SOR
Motif
Other DBs
NCBI-GeneID:
105432311
NCBI-ProteinID:
XP_011645372
UniProt:
A0A6I9XIC6
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MPMTPAITGMEEQEKLLEDAIGVVKVQAFQMKHCLDKSKLMDALKHASTMLGELRTSLLS
PKSYYELYMAITDELRHLELYLLDEFQKGRKVTDLYELVQYVGNIVPRLYLLITVGLVYI
KTTPGLKRDLLRDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDVTEGDDEDGTVRDSID
FXLMNFAEMNKLWVRMQHQGHSRDRERREREREELRILVGTNLVRLSQLESVTLDKYKKL
VLPGILEQVVSCRDAIAQEYLMECIIQVFPDEFHLQTLNAFLKSCAELQNGVNVKNIIIS
LIDRLAAFSQRSDGVGGPGSPNQVPGIPQDVKLFDVFSDQIATIIQTRQDMPPEDIVSLQ
VALINLAHKCYPDRVDYVDKVLFTTVQIFQKQNVDKLEYNSAVSRELVRLMKIPVDNYKN
ILTVLKLEHYAPLLDYFDYEGRKSLGIYIITNILENETLIPTQEQVDSVLFMVSSLVQDQ
SDQPNIEEDPEDFAEEQGLLGRLIHHFKSETPDQQYMILSAARKHFSAGGNKRIKFTLPP
IVFQSYQLAFTYKALKDQDEMWQKKCQKIFQFCHTTITALMKAELAELPLRLFLQGAIAI
GEIRFDNFEMVAYEFMSQAFSIYEDEISDSKAQLAAITLIIATFEQMSCFGEENAEPVRN
QCALYASKLLRKPDQCRGVATCSHIFWSGKSLTTGGKEMQEGGKVLDCLKKGIRIASQCM
DTSVQVQLYVELLNHYIYFYEKGNTAVTVQILNQVIAKIREELPNLETSEETDQIQKHLA
NTLEHLRNRMESPDSDGLSYQGLVL
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgccaatgacacctgccataacgggaatggaagaacaagaaaagttgttggaagatgca
atcggtgtagtaaaagttcaagcttttcagatgaagcattgtcttgacaaatctaaattg
atggatgcattaaaacatgcctctaccatgttaggagaactcagaacttctcttctgagc
ccaaagagctattatgaactgtatatggcaatcacagatgaattaaggcatttagaactt
tatttgttggatgaatttcaaaaaggaagaaaagttacagatctctatgaattagtacaa
tatgtaggcaatattgtacccagactttacttacttatcaccgttggtctggtttacatc
aaaacaactcctggtttaaaaagagatcttctgagagatcttgtggaaatgtgtaggggt
gtgcaacatccattgcgcggtttattcttgaggaattatttgttacagtgtacaagaaat
atcttgccagatgttaccgagggtgatgatgaagatggaactgttcgtgatagcatagat
ttcngtttaatgaattttgcagaaatgaataaattatgggtacgcatgcaacatcaaggt
cacagtagagatagagaaagaagagaaagggaaagagaagaacttcgaattttagttgga
acaaatcttgtacgacttagtcaactagaatcagtgacattggataaatataagaagctt
gtactgccaggaatcttagaacaagtagttagttgtagggatgcaatagcacaagaatat
cttatggagtgtataattcaagtctttcctgacgaattccatttacaaacgttaaatgca
tttttgaaatcgtgtgcagaattgcaaaatggagtaaatgttaaaaacataatcatatcg
ctgattgatcggcttgcagcctttagtcaacgatctgatggtgtaggaggaccaggaagt
cctaaccaagtgccaggaattccacaagatgtcaaattgtttgacgtatttagtgatcaa
atagcaaccattatacagacaagacaagatatgcctccggaagatattgtgtctcttcaa
gtagctctcataaacttagcacataaatgctatcctgatcgtgtagattacgtagacaag
gttttgtttacgacagttcaaatattccagaaacagaacgtggataagttggagtataat
agcgctgtttcaagagaattagttagattaatgaaaattcctgtagacaattataagaat
atattaactgtgcttaagcttgaacactatgcgcctctcttggattacttcgattatgaa
ggcagaaaatcactgggcatatacataataacaaatattttagaaaacgagacattaata
ccgacgcaagaacaagtagattcggtgctctttatggtatcttctttggtacaagatcaa
tcggatcaacccaatatagaagaagatcctgaagattttgccgaggaacaaggattgctc
ggtagattaatacatcattttaaatcggaaacaccagatcagcaatatatgatattaagt
gctgcgagaaaacattttagtgcaggcggtaacaaacgaataaaattcactcttccgcct
atagtttttcaaagttatcaattggcatttacgtataaagcattaaaggatcaggatgaa
atgtggcaaaagaagtgtcaaaaaatttttcaattctgtcacacaactattacggcatta
atgaaagccgaattagctgaattacctttaagactctttctgcaaggtgcgatagcaatt
ggcgaaatccgttttgataattttgaaatggttgcttacgaatttatgagccaagcattc
tcgatatatgaagatgaaataagtgattcaaaagcacagcttgcagcaatcaccttaata
atcgccacatttgaacaaatgagctgttttggcgaagaaaatgcagagcctgtacgcaac
caatgcgctttatatgccagtaaattgttaagaaaacccgatcaatgtagaggagttgct
acttgttcacatatattttggtctggaaaatctttaactacgggcggaaaagaaatgcaa
gaaggcggtaaagtattagattgtttgaagaaaggtattagaatagcaagccagtgcatg
gatacatctgtgcaagtacagctatatgtggagctgctgaaccattatatctatttctat
gagaaaggaaacacagctgtaactgtacaaatattaaatcaagtaattgcgaaaattaga
gaggaacttcctaatcttgaaacaagtgaagaaactgatcaaatacagaaacatttagca
aatacattggaacatttaaggaacagaatggaatcgccggattccgatggactttcctat
caaggccttgtcctttaa
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