Pogonomyrmex barbatus (red harvester ant): 105432371
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Entry
105432371 CDS
T04903
Name
(RefSeq) crossover junction endonuclease EME1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03440
Homologous recombination
pbar03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105432371
03460 Fanconi anemia pathway
105432371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbar03400
]
105432371
DNA repair and recombination proteins [BR:
pbar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
105432371
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EME1-MUS81_C
ERCC4
OB_DEPS-1_1st
Motif
Other DBs
NCBI-GeneID:
105432371
NCBI-ProteinID:
XP_011645459
UniProt:
A0A6I9WZ89
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MSRSVIVLSDSDEPASPVADKYDRNKSQTDGYHSDIENIFDFPKVPFCHEYALLSASQNK
NSFDLNEHFRESPMSDSEENQIEKSSRKTAVSKRDKTTSKEERSKRQQALAREKALKAIE
KKTSRDMKPGECIKFMEVNLDRHIDTFVSREEIESALRNVDIKFKITTELIPNSITWQRN
VEEDYIDEDNKVRTKSSIQIEEHVIVIWSNYEAVKHVAEGTFCTSISNSKDLIPSYSMTL
VIYGMEEYFTYRKKQKSDQNPGSKGPRYNGKNNQQLDTLPIISRQQLEMCLAEIQIVAKC
SSRLIENAQDLALMVYQYTKSISEIPYKLQKKGNQESKFDWYVMGDNKNTVRVDKDGNGL
KRLWQQQLCQFNLSSLETSEAICMAYPSPAQLIKAYRNCTPDEGVNLLKDISIRRAAGPI
TAARKIGPELSKKMYVMFTSQNGDALLGNEM
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagaagtgtgatcgtgttaagtgattcggacgaaccggcatcacctgttgctgac
aaatacgataggaataaatcacaaactgacggatatcattcagatattgagaatatattc
gattttccaaaggtacctttttgccatgagtacgcgttactctcggcgtcgcagaacaaa
aattcttttgatttaaatgaacacttcagagaatcgcctatgtccgactcggaggagaat
caaattgagaaatcatcacgaaaaacggcagtttccaagagggacaagacgacatcgaaa
gaagaacgatcgaaacgtcagcaagctttggcgagggagaaggcattgaaggcgatcgaa
aagaagacatcaagagatatgaagcccggcgaatgtatcaaatttatggaagtcaatctt
gatcgacatatcgacacgttcgtttctcgagaagaaattgaaagcgcattgcggaatgtc
gatatcaaattcaagataactaccgagttaattcctaatagtattacatggcagagaaac
gtcgaagaagactatattgatgaagataataaagtgcgtactaagagcagtatacagata
gaagaacatgttattgtgatctggagcaactacgaagcggtgaagcatgtagcggaaggt
acgttctgcacatctatttcgaacagcaaagacttgataccgagctacagtatgacccta
gttatctatggcatggaggaatatttcacgtatcgaaagaaacaaaagtcggatcagaat
cctggtagtaaagggcctagatataatggtaaaaataatcaacagcttgacacgcttcca
attatatccagacaacaactagagatgtgtttagctgaaattcagatagtagccaaatgc
agcagtagattaattgagaacgcgcaagatttagcgctgatggtatatcaatatacaaag
tccatttcggaaataccatacaagttgcagaagaaaggaaatcaggaaagcaaattcgat
tggtatgtcatgggagataataagaacactgtacgcgtggacaaagatggcaacggattg
aagagattgtggcaacagcagctgtgccaatttaatttgagtagcttggaaacatcagaa
gcgatatgtatggcttatcctagtccagcgcaacttatcaaggcttacagaaattgcaca
cctgacgaaggcgtgaatttattgaaagatatatcgataagaagagcagcaggacctatc
acagctgcacgtaaaatcggtcccgaattaagtaaaaaaatgtatgtgatgtttacatca
caaaatggagatgctttattagggaatgagatgtaa
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