Pogonomyrmex barbatus (red harvester ant): 105432395
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Entry
105432395 CDS
T04903
Name
(RefSeq) X-ray repair cross-complementing protein 5-like isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
105432395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbar03400
]
105432395
DNA repair and recombination proteins [BR:
pbar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
105432395
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_C
Calpain_III
DTHCT
FRG2
Motif
Other DBs
NCBI-GeneID:
105432395
NCBI-ProteinID:
XP_011645496
UniProt:
A0A6I9WPD1
LinkDB
All DBs
Position
Unknown
AA seq
569 aa
AA seq
DB search
MPPRKLKESLIFLVNVGVTRYGTQLLDKEKFILKHIIQKKIFLRPKDEIGVILMGTDNND
SDSITGLDNIQELCNMQIGNWDLIKSIEKLQVTDQSSSWMDAIYGAVEYIKHECIDKSER
KIILLSAFDEEEDIVGKFRAEDIAEALSSENISLIAIGEKALNTDENSQTASEILLREVL
QKIDGQYLTFEHAMSDVRFYKRPSTKPFLWYCQMELGDFRIPIVGISKMPTEVKLPEMVL
IAKMSTSDAPDQEVPIKNVAQWTDNNRTVHTQEDIIRGYVYGGKIIPVSDEAKKAMTPKN
NQKCYRIHGFTAKENVPMEYWLSDGSYVIVPANESVSAPFYSLVQAMVDKNVVAIVEKVH
RANTEANMVALFPSVDVPNEPWCLIEIGLPFERDYGAIAQKPLKFVMKQLSKEQDEAMDD
LLKSLELPDVNADDATNISEKYLPGYMPDPGAQHMWDTLAARALNPDKSLPPIADDVLNL
LEQPEFIREKCKPVTERIKNLFSLEKKKPLRKRKGSSEDDNKQSDGNNVAQTQTIKEKEK
DDVNDNSDQSQNVTLPDACNFNFSDLAEM
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaaggaaattaaaggagagtttaatttttctggtgaatgttggagttactcgt
tatggcacacaattgctggataaggaaaagtttattcttaaacacattatccagaagaag
atattcctgcgtcccaaggatgaaataggagttatattaatgggcacagataacaatgac
agcgacagtattacaggattggataatatacaagagttgtgtaatatgcagattggaaat
tgggatttaataaaaagtattgagaaactgcaagtcacagatcagagtagttcttggatg
gatgcaatttatggcgcagttgaatatatcaaacatgaatgcatagataaatctgaaagg
aaaataatcttgttgtctgcttttgatgaggaagaagacatcgttggcaaatttcgagct
gaggatattgcagaggcattaagttcagagaacatttcactcatagcaattggagagaaa
gcattgaatacagatgagaattctcaaacagctagtgagatattgcttagagaagttctg
caaaagattgacggtcaatatctcacttttgagcatgctatgtcagatgtacgtttctac
aaacggccatcgactaaaccattcctgtggtactgtcagatggagttaggcgattttcgc
ataccgatcgttggaatttctaaaatgccaactgaagtgaaattaccagaaatggtatta
atagctaagatgagcacatctgatgcacccgatcaagaagtgccaattaagaatgtcgca
cagtggactgataacaatagaactgttcatacacaagaggacattattcgtggctatgtg
tacggtggcaagattattcctgtttcagatgaagctaagaaagcaatgacacccaaaaat
aatcagaaatgttataggatccatggtttcactgcaaaggaaaacgttcctatggagtat
tggttgtcggatggctcatatgttattgttcctgctaacgagtcggtaagtgcaccgttt
tatagcctggtgcaagccatggttgataagaatgtcgtcgcaatagttgagaaagttcat
agggcgaataccgaagctaacatggtggcattatttccaagtgttgacgtaccgaatgaa
ccttggtgtcttattgaaatcggtttgccattcgagcgagattacggagcaatagcacag
aaacccttgaaatttgtaatgaaacaattatcgaaggagcaggatgaggccatggatgat
ttattaaagtccttagaattgcccgatgtcaatgcagatgatgctactaacattagtgag
aaatatttaccaggatatatgccagatcctggagcacaacacatgtgggatacattagca
gctcgcgcacttaatccggataaatcgttgccacctatcgctgacgatgtgctaaatctt
ttagagcaacctgaatttataagggaaaaatgcaaaccagtgactgaaagaattaaaaac
ttattttctttagaaaaaaagaaacctcttagaaagcgtaaaggatcatcagaagatgat
aataaacaatctgatggtaacaatgtcgcgcagacgcagacaattaaagaaaaggagaaa
gatgatgtaaatgacaatagcgatcaatcacaaaatgtcactttacctgatgcatgtaat
tttaattttagtgatcttgctgagatgtaa
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