Pogonomyrmex barbatus (red harvester ant): 105432500
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Entry
105432500 CDS
T04903
Name
(RefSeq) ATP-dependent RNA helicase vasa, isoform A-like
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pbar03036
]
105432500
Enzymes [BR:
pbar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105432500
Chromosome and associated proteins [BR:
pbar03036
]
Eukaryotic type
Gene silencing
piRNA pathway
105432500
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
Cas3-like_C_2
CMS1
Utp25_C
Motif
Other DBs
NCBI-GeneID:
105432500
NCBI-ProteinID:
XP_011645644
UniProt:
A0A6I9WR32
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MAEEQWGGDDELDFSQAPVDTSSFDEGRAPCRGKGRGTILYNNNDSNYSAGGYNSYDKKK
GDCEESYDNNAQNENRENNRYNGNRFGGNRQDNDKPHGNNRSDNDGNDRRWQDNRDRNNS
RRNRDDNNDETEDNGYSGSYQNGRNDRPRRDRDDNRGGRGYGRNRDGGDDGGGFNDSGDR
GRRRNGSDREDNKDEPKKREIYVPPEQPDDENSLFGNDVSMGINFDKYDDIEVKVSGENA
PRPIQSFDRSGLRSILLENIKKSGYTKPTPVQKYAIPIIMNGRDLMACAQTGSGKTAAFA
VPIIHNLLEDPRDLIKTNTSCEPHVIVVSPTRELTSQIHQQFRKFALGSIIRTELVYGGT
SVSHQTHKVLNGCHILVATPGRLLDFMERGKIKLSSLRFLVLDEADRMLDMGFLPDIEKI
IDHETMVAPEERQTLMFSATFPSEIQELAGRFLRNYLFLAVGIVGGACSDVEQNFYQASG
QSEKRKLLKELIDKQNQMGGIEGTLVFVEQKRHTDFIAAFLSESNFPTTSIHGDRLQRER
EEALYDFKRGKMMILVATAVAARGLDIKNVSHVINFDLPKTIDEYVHRIGRTGRVGNRGK
ATSFFDSNVDTPLTGDLVKILKQANQPVPDWLESGGGGGSRTFMPGRGRRFGGEDIRGNK
DAYDDRYEDVGYAPPVPAEPEEVW
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaacagtggggaggtgatgatgagttggacttttcacaggcgccagtagat
acgtcctcctttgatgaaggacgtgctccctgccgtggtaaaggacgtggtacaattctg
tacaacaacaatgactcaaattacagtgctggaggttataattcttatgataaaaaaaaa
ggagattgtgaagaaagttatgataataatgctcaaaatgaaaatcgcgaaaataataga
tataatggcaatagatttggaggaaacagacaagacaatgataagccacatggaaataac
agaagcgacaatgatggaaacgatcgtaggtggcaagataatcgagataggaataatagt
agacgaaacagagatgacaataacgatgaaactgaagacaacggctacagcggaagttat
cagaatggtagaaatgatagacctaggagagatagagatgataatagaggtgggagaggt
tacggtagaaacagagatggcggtgatgatggtggtggtttcaacgattctggagacaga
ggacgcagaagaaacggcagtgatagagaagacaataaagatgaaccaaagaagagggaa
atttatgttccgccagagcaacccgatgatgaaaattccttgtttggaaacgatgtgtca
atgggaataaatttcgataaatacgacgatatcgaagtaaaagtgagtggtgagaatgca
cctcgtccgatacaatcctttgatagatccggcctcagaagtattttattagaaaatatc
aagaagtcaggttatacaaagcctactcctgttcaaaaatacgctattccaattataatg
aatggccgcgacttaatggcatgtgcacaaaccggttcaggcaagactgcagcatttgca
gttcctatcatacataatctattggaagatccaagagatttaattaaaacgaatacttcc
tgcgaaccacatgtgattgttgtgtcgcccacacgtgagcttacttcccagattcatcaa
cagttcaggaaatttgctttgggctctatcatacgtactgaacttgtttacggaggaaca
tcggttagtcatcaaacacacaaggtgctcaatggttgccatattctagtcgcaactcca
ggtagattattagatttcatggaacgagggaaaattaaactttcttccttacgttttctt
gtactggatgaagctgacagaatgcttgatatgggtttcttacccgatattgagaagatc
atagatcatgagacaatggtagcgccagaagaaagacagacacttatgttctctgctact
ttcccgagtgagatacaagaacttgcgggtcgatttttacgaaattatttattcctcgca
gttggaattgtgggtggtgcttgctctgatgtagagcaaaacttttatcaagcatctggc
caatctgagaaacgaaaattattgaaagaattgatagataaacaaaatcaaatgggaggt
atagaaggtactttagtatttgtcgaacagaaaagacatacagacttcatcgcagctttc
ttatcagaaagcaattttccgacgactagtatacatggtgacagattacaaagagaacga
gaagaagccctgtatgattttaaacgaggaaagatgatgatcttagtggcaacggcggtt
gccgcgcgaggcttagatatcaaaaatgtctcgcatgtaattaattttgatttaccaaaa
acaatagatgagtatgttcataggatcggacgaactggtcgagtaggaaatcgcggcaag
gcaacttcgttttttgattcaaatgttgatacacctctcaccggtgatttggtcaaaatt
ttgaagcaagctaatcagccggtacctgactggttagaatcaggcggtggtggtggaagt
agaacctttatgccaggaagaggaagaagattcggcggagaagatatcagagggaacaag
gatgcatatgatgatagatacgaggatgttggttacgcaccacctgtaccagcagaacca
gaagaagtttggtag
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