Pogonomyrmex barbatus (red harvester ant): 105432622
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Entry
105432622 CDS
T04903
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03030
DNA replication
pbar03410
Base excision repair
pbar03420
Nucleotide excision repair
pbar03430
Mismatch repair
pbar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105432622
03410 Base excision repair
105432622
03420 Nucleotide excision repair
105432622
03430 Mismatch repair
105432622
03440 Homologous recombination
105432622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbar03032
]
105432622
03400 DNA repair and recombination proteins [BR:
pbar03400
]
105432622
Enzymes [BR:
pbar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
105432622
DNA replication proteins [BR:
pbar03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
105432622
DNA repair and recombination proteins [BR:
pbar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
105432622
MMR (mismatch excision repair)
DNA polymerase delta complex
105432622
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
divDNApol
DNA_pol_B_2
DUF6356
Motif
Other DBs
NCBI-GeneID:
105432622
NCBI-ProteinID:
XP_011645821
UniProt:
A0A6I9X032
LinkDB
All DBs
Position
Unknown
AA seq
1092 aa
AA seq
DB search
MNKISRKPFSTPSAAKKLKYRDDDDEKPSSFEAELAVMDFADDDFPDETLLIGEGPEQEN
TSAKWSRTPPPSLNPQIDTLTFQQIEIDHYIGRPLPGMPGSKIGPVPIMRMFGVTELGNS
VCCHVHGFCPYLFVSAPPNFTNNHCRPFKEALDQAVKKDMKSNPDNIQETILAVEVVYKQ
SMYGYEGHNKLPFLKITVAVPKLIAPCKRLLETDTVYTAFNYHYRAFESNIDFDIRFMVD
TSVVGCSWIELPPGSWKLRGQYGHILELTTRCQLEVDVAWDAFISHAPEGEWSKIAPFRI
LSFDIECAGREGIFPEAKHDPVIQIANMVIRQGEPEPFLRNIFTLDTCAPIVGCQVLSFD
KESLMLEKWADFVRQLDPDIFTGYNINNFDFPYLINRAQHLNVKNFNFLGRIKNIKSVIK
DHVLQSKQLGRRENKSINFEGRVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVQHK
DITGLQNGNAQTRRRLAVYCLKDAYLPLRLLDKLMCVIIYMEMARVTGVSISSLLTRGQQ
IKVVSQLLRKTREKDYLMPVHQGHGTDEQFEGATVIEPKRGYYNDPIATLDFSSLYPSII
MAHNLCYTTLLTVAKKKELNIEEDQIITTPSNSFFIKSTMRKGILPEILENLLTARKRAK
AELKQETDPLKQKVLDGRQYALKVSANSVYGFTGAQMGKLPCLEISASVTAYGRTMIEQT
KQEVEDHFRIENGYKNDAIVIYGDTDSVMVKFGVKSIEDAMELGKEAADYVTSKFIKPIK
LEFEKVYFPYLLINKKRYAGLYFTKPDKYDKMDCKGLETVRRDNCPLVANMMNTCLQILL
IERNPSAAVDYAKQVISDLLCNRIDLSQLVITKELTKTDYAAKQAHVELAAKMKKRDAGN
APKLGDRVAYVFISAAKGAPAYQKAEDPVYALQNSIPIDTNYYLENQLAKPLVRIFEPIL
GEKAESLLLKGDHTRTRCIATSQVGALAAFTRKKETCLGCKAVLPPDREDKAVCKHCESQ
EAELFHNELQAQHKLEEKFSRLWAECQRCQGSLHQEVICSNRDCPIFYMRVKSRIDMAAK
IKRIQRFGVPEW
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaataagtcgaaaaccgttttcaacaccttcagcagcaaaaaaactcaaatat
agagatgacgatgatgagaaacctagttcgtttgaagctgaactggccgttatggatttt
gcagatgatgattttccagatgaaacattactaataggagagggacctgaacaggaaaat
acatctgcaaaatggagcagaactcctccaccgtctttgaatccacaaattgatacatta
acattccagcaaattgaaattgatcattatataggtagacccctccctggaatgccaggt
agtaaaataggacctgtacccataatgaggatgtttggtgttacagaattaggaaattct
gtatgttgtcatgtccatggcttttgtccatatctgtttgtatcagcaccaccaaatttc
acaaacaaccattgcagaccattcaaagaagctcttgatcaagcagtaaaaaaggatatg
aaatcaaacccagataacatacaagaaaccatcctagcagtagaagtggtctataaacaa
tcaatgtatggatatgaaggacataataaattgccgtttttaaaaattacagtggctgtt
ccaaaattgatagcaccttgtaagagattattagaaacagacacagtttatactgcgttt
aattatcactatagagcctttgaaagtaacatcgattttgatatcaggtttatggttgac
acatcagtagttggttgctcttggattgaattaccaccaggaagctggaaattacgtggc
caatatgggcacatattggaactaactactcgatgccaactggaagtggatgttgcatgg
gatgcttttatatctcatgcaccagaaggagaatggtccaaaatagctccatttagaatt
ctcagtttcgatattgaatgtgctggacgcgaaggtatctttccggaagcaaaacatgat
cctgtgatacaaattgctaacatggtcataagacagggcgagcccgaaccgtttttaaga
aatattttcactcttgatacttgtgcgcctatcgttggttgtcaagtgttgagctttgac
aaggaaagtttaatgttagagaaatgggctgattttgtgcgtcaattagatcctgacatt
ttcacaggctataacataaacaattttgattttccgtatttaattaatcgtgcacaacat
cttaatgtgaaaaacttcaacttccttggtcgaataaagaatataaagtctgtaattaag
gatcatgtactgcaaagcaaacaattaggtcgtcgtgaaaacaaatcaattaattttgaa
ggaagagttccattcgatttattattagtattagttcgagattataaattgagatcttat
actctgaatgcggtatcgtatcattttcttcaagaacaaaaagaagatgttcaacataaa
gatattacgggactacaaaatggaaatgcccaaacacgtcgacgtctcgctgtatattgt
ttgaaggacgcatacttaccacttagattattagacaagctaatgtgtgttattatctat
atggaaatggcaagagttacgggagtgtctatttctagcttattaactcgtggacaacaa
atcaaagtcgtttcacaacttttacgcaagacccgggaaaaggattacttgatgccagtg
catcaaggccatggtaccgatgagcaatttgaaggagcgactgtcatagagcctaagcgt
ggctattacaatgatccaatagctaccttagatttcagttctttgtatcctagtattatt
atggcgcacaatttatgttacacgacattattaaccgttgctaaaaaaaaggaattgaat
attgaagaagaccaaattattacaactcccagtaattcatttttcattaagagtaccatg
agaaaaggaattcttccagagattttggaaaacctattgacagccaggaaaagagcgaaa
gcagaattaaagcaagaaacagatccattgaagcaaaaggtactcgatggtagacaatat
gctttaaaagtgtcggcgaattcggtctatgggttcacgggtgcgcaaatgggaaaatta
ccatgtttggaaatatctgctagcgttaccgcttatggacgtactatgatagaacaaaca
aaacaagaagtagaggatcactttcgcatagaaaatggatacaaaaacgatgcgatagtc
atatacggtgatactgactctgtcatggtgaaatttggcgtgaaatctatagaggatgca
atggagcttggtaaagaagctgccgattatgtgacatctaaatttatcaaacctataaaa
ttagagtttgagaaagtgtattttccatatctcttaattaacaaaaaacgttatgctggt
ctatattttacgaaacctgataaatacgataaaatggattgcaaaggtctcgaaacggtg
cggagagataactgtccgttggtcgcgaacatgatgaatacctgtttgcaaatattgctt
attgagagaaatccaagcgctgccgtagattacgccaaacaggtcattagcgatcttttg
tgtaatcgtattgatctttctcaattagtaatcacgaaagaactaacaaagactgattac
gcggcgaagcaagcgcatgtcgaactggcggcaaaaatgaagaaacgagacgccggaaac
gcaccgaaacttggtgatcgtgtggcatatgtatttataagcgcagctaaaggtgctccg
gcataccagaaggcagaagatcctgtttatgcgctgcagaatagtatcccaatagacacg
aattattatctagagaatcaattggcgaaacctcttgtacgtatctttgaacctatcctc
ggcgagaaagcagagtcacttcttttgaaaggagatcatacacgcacgagatgcatcgct
acatcacaagttggagcgctcgcggcttttacacgtaaaaaagaaacctgtttgggctgc
aaagctgttttaccgccagacagagaagacaaggcagtatgtaagcattgcgaatctcaa
gaggctgaattgtttcacaatgagttacaggcccagcataaactggaagagaagttttcc
agattgtgggcagaatgtcaaagatgtcaaggaagtcttcatcaagaagttatatgctct
aaccgtgactgcccaatattttacatgagggtgaaatctcgaatagacatggctgcaaaa
attaaacgaatccaaagatttggtgttccggaatggtaa
DBGET
integrated database retrieval system
