Pogonomyrmex barbatus (red harvester ant): 105432704
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Entry
105432704 CDS
T04903
Name
(RefSeq) protein SMG5
KO
K11125
protein SMG5
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105432704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbar03019
]
105432704
03032 DNA replication proteins [BR:
pbar03032
]
105432704
Messenger RNA biogenesis [BR:
pbar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
105432704
mRNA cycle factors
Common to processing body (P body) and stress granule
105432704
DNA replication proteins [BR:
pbar03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
105432704
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
105432704
NCBI-ProteinID:
XP_011645937
UniProt:
A0A6I9WQ93
LinkDB
All DBs
Position
Unknown
AA seq
1013 aa
AA seq
DB search
MRRSYNTTVEARTTDCLEATRRLHKSVTEIVKKLDEQKNRALTVSDIFVPSGEIQRMKLK
DYCERLILKDPVGNVHKIEELLWRKAFYDVVYAAKKLRKGNIWNDLEKMLLSVHLEVGVG
YYHHLILRLQMEYDLDLVGVVDFAFIQNESISSYARIKTGQSKTHTKEVKQCVVRLIHRS
LVCLGDLSRYKLEINSNWDPMIANRYYKMAIAIDPNIGMPHNQLGTIAGNKNYGLDAVYH
YMRSILCPEPFEGAEGNLKKIVITHSTYTDESNSVHHCVSRLFSLLRLWDFENPHSDRIN
QECQDLLTDIENCLAAEQVEPNNTNCLENVDNIEIYLQNCKNRPTLYLTDDMIFKIVTIC
LMSISRLKNKESNEVQGVVAITLAILSQLLEFIIKKLQETIIDMGMPDVEAIVQAKDQES
SKLENGGHIEEKDSISSKDNNILNLDENNKKSSDNGIVNKPGLKKIRDKSKNLLNKLRRR
KRRTSSDSDASDIDQSTLASSSDEINSDVSETEEDDALSEGNDALSDDNTEDEESSPENK
IESSENAVKITKEKMNGHSSDVTEKSENCDKDNTSHLVNGQQHTTDQQTDSKTSDKDSIT
NSSSVVTMNTNSTNTLEEGNDGMCNADISYMAQLKKRSLKPDDILNMLIGKEILVSIKVC
CDWLRSNPDIIRICAKSSRTLLKRVTILLNLIDVDIEAVVQGHEDSTILSSVERLKECVK
IIPLPEDIDLRGLNLLENAHKSLDWQILRKHKMNKREETLLRILKLLEFGHHLCSVEDSR
VRYNRIERLFVVTDANLSNAPKVTGLDDKNFGPEHSKGKLMRHMGRLWLNAEVRALESQL
RSRLISPYLVPDHEALAKHTPALKRLVYAKKFIVVIPAVVVSALDEVKRVSAQAREATRW
LEIQLRRGSRFLRAQRPHERLALPLIKGPRPKDKEAWLFFQIIECCHYLTQQAKVGFTGD
GEVPVVTLLTGCKPDDRKALTFSPDGLAKSAGVNLEHIESFQIKWKSSFKSYG
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggtcttataacactacggtggaggcccgaacaacggactgcctcgaagccacg
agacgtctgcataagagcgtgacggaaatcgtcaagaaattggatgagcaaaagaatcgt
gccttgacggtaagcgacatatttgtcccatctggggaaattcaacgtatgaaattaaag
gattattgtgagaggctgatactgaaagatcctgttggaaacgtacataagatagaagaa
ttactttggagaaaagccttttacgatgttgtatatgcagccaaaaaattacggaagggt
aatatctggaatgatttggaaaaaatgttgctatcggtccatttggaagtgggtgtggga
tattatcatcatctgatactgagactacaaatggaatatgatctagatcttgttggtgtt
gtcgattttgcgtttattcagaatgaaagtatttcatcatatgcaagaattaaaaccggg
caatctaaaactcataccaaggaagtcaaacaatgcgtcgtgcgcttgattcatcgaagt
ttagtatgtcttggagacctgagcaggtacaaattagaaataaattcaaactgggatcca
atgatagcaaacaggtactataagatggctatagccattgatccaaatattggtatgcct
cacaatcagttaggtactatagcaggcaataaaaattatgggctggatgcagtctatcat
tacatgagaagcattttgtgtcctgaaccattcgaaggagcagaaggaaatctaaaaaaa
atcgtaataactcattctacttatacggacgaaagcaattctgtccatcattgcgtatcg
cgattattttctttattacgtttatgggattttgaaaatccacattctgacagaataaat
caagaatgccaggatctcttaactgatattgagaattgtttagcagcggaacaagtcgag
ccaaataatacaaattgtctagaaaatgtggataatatagaaatatatcttcaaaattgt
aaaaacagaccaacgctttacttaacagacgatatgatatttaagattgtgacaatatgc
ctaatgtcaatttctagattaaagaacaaagaatccaatgaagtacagggtgttgttgct
ataactttagcaatactgtcacaattgttagaatttataataaagaaattacaagaaacg
attatagatatgggaatgcctgatgtagaagcaattgtgcaagcaaaggatcaggagtca
tctaaattggaaaatggaggtcatatagaggaaaaggattctatttcgagcaaagacaat
aatatactcaatttagatgagaataacaaaaaatcatccgataatggaatcgtgaataaa
ccaggtctcaaaaagattcgcgacaaatcgaaaaatcttctcaataagcttcgtagacga
aaaaggagaactagttccgattcggatgcgagcgatatagatcagtcaacattggcatca
tctagtgatgaaatcaactctgatgtgtccgagactgaggaggatgatgcactgagtgaa
ggaaacgacgcattatcggacgataatacggaggacgaggaatcatcgccagaaaataaa
atcgaatctagcgaaaacgcagtgaaaataacgaaagaaaagatgaatggtcatagtagc
gatgtcactgagaaatctgaaaattgtgacaaggataatacaagccatttggttaacggt
caacagcacaccaccgatcagcagacggactcgaaaacaagtgataaggattccataacg
aattccagcagcgtcgtgacgatgaacacaaattcaactaacactttggaggagggtaat
gatggcatgtgtaacgcggatatctcttacatggcacaattgaagaagcgaagtttaaag
ccggacgacattttaaacatgttgatcggcaaggagattcttgtttctatcaaagtatgc
tgtgattggttacgaagtaatcctgacatcataagaatatgcgccaagagttcacggaca
ttactgaagcgtgttacgattttactaaatctgattgacgtggatatcgaagctgttgta
caaggacatgaggattccacgattttatcgagtgtggaaagattaaaagaatgcgtgaag
ataatacctctaccggaggatattgacctccgaggattgaacttgctggaaaacgcacat
aaatctcttgattggcaaatactacgtaaacacaaaatgaacaagcgggaagaaacgttg
ctgaggatattgaagttacttgagtttggacatcatctctgttccgtcgaagattcaaga
gtacgatacaatcgaatcgaacgattgttcgtcgtaacggacgcgaatctctcgaatgcc
cctaaagtaacaggtctggatgacaaaaactttgggccggagcattcgaaaggaaagctt
atgagacacatgggtagattgtggctaaacgctgaggttcgagctctggaaagccagtta
cgatctcgattgatatcgccgtatctcgtccccgatcatgaagctttagctaagcatacg
ccggctcttaaacgcttggtgtacgcaaagaagtttatagtagtgattcccgcggttgtc
gtttctgctttggacgaggtgaaacgcgtaagcgcccaggcgagagaagctacacggtgg
ttggaaattcaattgaggcgcggctcaagattcctacgggcgcaaagacctcacgagcgt
ttggcgttaccattaataaaaggaccaagaccaaaggacaaagaagcatggttgtttttc
caaataatagaatgctgtcactaccttactcagcaggcaaaagtgggttttaccggtgac
ggggaggtaccggttgtgacccttctgactggttgtaaaccagacgataggaaagctctg
actttcagtcctgatggattagcaaaaagtgcaggtgttaatcttgagcatatagaatca
tttcaaataaaatggaaatcgtcgtttaagagttacggttga
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