Pogonomyrmex barbatus (red harvester ant): 105432741
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Entry
105432741 CDS
T04903
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbar03016
]
105432741
Enzymes [BR:
pbar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
105432741
Transfer RNA biogenesis [BR:
pbar03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
105432741
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Motif
Other DBs
NCBI-GeneID:
105432741
NCBI-ProteinID:
XP_011645986
UniProt:
A0A6I9WQD1
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All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
METDDGKHCMHYVVRKKRFCRMTVREGRRYCGEHQRDVAGCPDERVPCPLDPTHTCYRSK
LTRHLSVCNAKRKLDTRPPFVIEGANLDDETIAMPLRVPLSQLDESVVETVIRKIHAAYE
KLSEFPRVILQHDVLKDKLNDKTCGSNVKKHLLQNASLLGHLERAGLVCDDTCFIEFGAG
KAQLTYWLGQIVKNKSNSCILLIDRSSHRHKNDNKLKREESHLVIKRIHADIADLQLNQV
AEIQPVKYKVGIAKHLCGTATDLSIRCLVNSIKNEPKVDVRGLVLAFCCHHKCEYSSYVG
REYLQGCDFTADEFPVLCSIVSWATCRLKNDRSELDEREVTGRKAKILLNWGRLVFLKNA
GFXGRAALHTSTDVSLEKQCAS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggagacggacgacggcaaacactgcatgcattacgtcgtgcgcaagaagcggttctgc
cgcatgacggtgcgggagggccgtcgatattgcggcgaacatcagcgggacgtcgccggc
tgccccgacgagagggtgccatgtccgttggatcccacgcacacatgctatcgctcgaag
ttgacgagacacctaagtgtgtgtaacgccaagcgcaagttggacacgcgaccccctttt
gtgattgagggagcaaatttggacgatgagactatcgcaatgccgctacgcgtgccgcta
tcacaactcgacgagtctgtcgtagagacggtgataaggaagattcatgctgcctacgaa
aagctatcggagtttccccgagtcattctgcagcacgatgtgctcaaggataaattgaac
gataaaacctgcggcagtaacgtcaaaaagcacttgcttcaaaatgcgtctctgctggga
catctagagcgagctggtctcgtgtgtgatgacacttgctttatcgaattcggagcggga
aaagctcagctaacatattggttgggacaaattgtaaagaacaagtcaaattcttgcatc
ttgttaatcgatcgttctagtcaccgacacaagaacgacaataagcttaagagggaagag
agtcatctcgtaataaaaagaatacacgccgacattgccgatttgcagctaaatcaggtc
gcggagatccagccggtcaagtacaaagttggtatagcgaagcatctgtgtggtacagct
acagatttgtcgatacgatgtttggtgaattcaataaagaacgagcccaaggtcgacgtt
cgtggtctggttctcgcgttttgctgccatcacaaatgcgagtactcgtcgtacgtgggc
cgagagtatctgcaagggtgcgatttcactgcggacgagtttcctgtgttatgcagcata
gtcagttgggcgacttgccgtttgaagaacgaccgatcggaattagatgaacgcgaagtt
accgggcgcaaggctaaaatcctactaaattggggtcgcctggtattcttaaagaacgct
ggatttncaggccgagctgctttacacacttccaccgatgtctcgttggaaaaacaatgt
gcatcgtag
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