KEGG   Pogonomyrmex barbatus (red harvester ant): 105432908
Entry
105432908         CDS       T04903                                 
Name
(RefSeq) splicing factor 3B subunit 1
  KO
K12828  splicing factor 3B subunit 1
Organism
pbar  Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pbar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105432908
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pbar03041]
    105432908
   03036 Chromosome and associated proteins [BR:pbar03036]
    105432908
Spliceosome [BR:pbar03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    105432908
 Complex B
    105432908
 Complex C
   U2 SnRNP specific factors
    105432908
Chromosome and associated proteins [BR:pbar03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    105432908
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG UME CEP104-like_TOG DUF2298
Other DBs
NCBI-GeneID: 105432908
NCBI-ProteinID: XP_011646212
UniProt: A0A6I9XKA3
LinkDB
Position
Unknown
AA seq 1303 aa
MDSIPRTHKDIEAQIREIQSKKKELLNTVPEKEQVALGKTGFYDQDIYDSSNNKFDGYVT
SIATNDEIEDYDPFADKRLPTIADREEKDYDPFADRRRPTIADREDEYRQKRRRMIISPE
RVDLFAEGGKTPDIGSRTYTEIMREQMLKGEETELRKRLAEKAKDGTLKANGEPKPAPKK
RGRWDQTDDTPVQKKLSGASATPTSWDNADVTPAAIRWDETPGHGKGAETPGATPGVSTR
MWDATPAHATPGAATPGRETPSHEKTVTSRRNRWDETPKTERETPGHSSGWAETPRTDRV
AGDLIQETPTPSASKRRSRWDETPSNQTPGSMTPQTPATPLATPHQTTILTPSAVTPTGP
KAMGLATPTPGHLMSMTPEQLQAYRWEREIDERNRPLSDDELDALFPPGYKILQPPAGYI
PIRTPARKLTATPTPIAGTPQGFFIQTEDKSAKYVDNQPKGNLPFMKPEDAQYFDKLLVD
VDEETLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMS
PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA
KAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFLKAVCRSKKSWQAR
HTGIKIVQQIAILMGCAILPHLKSLVEIIEHGLVDEQQKVRTITALAIAALAEAATPYGI
ESFDSVLKPLWKGIRTHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPD
EEMKKIVLKVVKQCCATDGVEAQYIKDEILPHFFKHFWNHRMALDRRNYRQLVDTTVEIA
NKVGASEIINRVVDDLKDENEQYRKMVMETIEKIMGNLGAADVDSRLEEQLIDGILYAFQ
EQTTEDVVMLNGFGTIVNTLGKRVKAYLPQICGTILWRLNNKSAKVRQQAADLISRIAVV
MKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLT
PILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHKKAIRRATVNTF
GYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPEL
NVQNGVLKSLSFLFEYIGEMGKDYIYAVSPLLEDALMDRDLVHRQTACAAIKHMALGVYG
FGCEDALIHLLNHVWPNVFETSPHLVQAFMDAVDGLRVALGPIKILQYTLQGLFHPARKV
RDVYWKIYNSLYIGGQDALVAGYPRIMNDPKNQYIRYELDYIL
NT seq 3912 nt   +upstreamnt  +downstreamnt
atggattccatcccgaggacgcacaaagatattgaagcacagataagagagatacagtcg
aagaagaaggagcttttgaatacggtgcccgagaaagaacaggttgctttgggaaaaact
ggtttttatgatcaagacatatatgatagcagcaacaataaatttgatggttatgttaca
tcgattgcaaccaatgatgaaatcgaggattatgatccgtttgcggacaaacgattaccc
accatagctgacagagaagagaaggattatgatccatttgcagacagacgacgacctact
attgctgacagggaggatgaatacaggcagaaaagacgtagaatgattatttctcctgaa
cgtgtcgatctttttgcagaaggtggtaagacacctgatattggttccagaacatatact
gaaattatgcgggagcaaatgctcaaaggtgaagagacagagctgagaaaaagattagca
gaaaaggcaaaagatggtactttgaaagccaatggtgaacctaaaccagctcctaagaag
agaggtcgctgggaccaaaccgatgacactccagtgcagaaaaaattatctggtgcttca
gcaacacctacatcttgggataatgcagatgtaacaccagctgcaattagatgggacgaa
actccaggtcatggtaaaggagcagaaactcccggagcaactccaggagtaagtacgaga
atgtgggatgccacgccagcacacgcgacaccaggagctgcaactccgggcagagagacg
ccttctcacgagaaaactgtaacaagccgaagaaatcgttgggatgaaactccgaaaact
gaaagagaaacacccggacacagcagcggttgggcggaaactccgaggaccgatcgagtc
gctggggatttgatacaggaaactccgacaccctcggcaagcaaaagacgaagtcgatgg
gacgaaacgccatcaaatcaaacaccaggatcgatgacgccgcaaaccccggcgacgcct
cttgcgacaccccatcagacaacgatattgaccccaagcgccgtcacgccgacaggaccc
aaggcaatgggtctagctactccgactccaggacatttgatgtccatgacacctgaacag
ctgcaggcttatcgttgggaacgcgagatagacgagcgaaacagacccctatcggacgac
gaattagatgcattgtttcctcctggatacaagatcttacaacctcccgcaggatatatt
cctattcgcacacctgctagaaagctcactgcgacgcctacgcctatcgccggtacacct
caaggtttcttcattcaaacagaagacaagagtgcgaagtacgtggataatcaaccaaag
ggcaatttgccatttatgaagccagaagacgcgcaatatttcgacaaattattggttgac
gtagacgaagaaacattgagtccggaagagcaaaaggaaagaaagatcatgaaattgctc
ctaaaaataaaaaatggaactcctccgatgcgtaaagccgctttaagacaaatcactgac
aaggcgagagaatttggagctggaccgttgtttaatcaaattctaccgcttttaatgtca
cctacgcttgaggatcaagaacgtcatttattggttaaagtcattgatcgtattttatat
aaattggacgatttggtgcgaccatatgtacacaagattctagtcgtcattgagcctcta
ttgattgatgaagattactatgctcgagtcgaaggtagagaaattatttctaatttggct
aaagctgcaggattggctacgatgatttctacaatgagacctgatattgataacatcgat
gaatatgtacgtaacacaacggcaagagcttttgcagttgtcgcatccgccctcggaatt
ccttcgcttcttccgttcttaaaagctgtttgtcgcagcaaaaaatcctggcaggcacga
catactggtattaagatcgtgcaacaaatagctattttgatggggtgcgccattttacca
cacctgaagagtttagtggaaattatagaacatggtttggtggatgaacagcagaaagta
agaacaattacagcattagctatcgctgcacttgctgaagcagcaacaccatatggcatt
gaaagttttgactctgtattgaaaccactatggaaaggtatccgtacacatagaggaaaa
ggtttagcagcttttctaaaagctattggttatctcatccctttgatggacgcggaatat
gcgaattattatactagggaagtaatgttaattcttatacgtgaattccagtctcctgat
gaagaaatgaagaaaattgtgttgaaggtggtcaaacaatgctgtgcaacagacggtgta
gaagctcaatacataaaggatgaaatcctgcctcacttctttaaacatttttggaatcat
cgtatggcattggatcgcagaaattacagacagcttgtggacacgacagtagaaatagcc
aataaagtgggcgcatcagagattattaacagagtagtggacgatttaaaggacgaaaat
gagcaatacagaaaaatggtaatggaaactatcgagaaaataatgggcaacttaggagca
gcggatgtcgattcgcgtctagaggaacagctcatcgatggaattttatacgctttccaa
gaacagactactgaggatgttgttatgttgaacggttttggaacgattgtgaacacatta
ggcaaaagggtgaaggcatatcttccccaaatatgtggcacaatattgtggcgattaaat
aacaaatctgcaaaagtgcgacagcaagctgctgatcttatttcgcgcatcgcagtagtt
atgaagacgtgtcaagaggaaaaactaatgggacatttgggagtcgttttgtatgaatat
ttaggcgaagaatatccagaggtactaggtagcattttaggagcgttaaaggctattgtt
aatgtcataggtatgacaaagatgacaccacctattaaggatttgttaccaaggctcaca
cccattctgaaaaacagacatgaaaaggtgcaagaaaattgtattgatctcgtaggcaga
atcgcagatcgtggaccagagtacgtctctgctcgggaatggatgagaatatgctttgaa
ttgttggaattattaaaagcgcataaaaaagcaattagaagagctacagtaaatactttt
ggctatattgccaaagctattggaccgcatgatgttttggcgacacttttaaataatctg
aaagttcaagagcgtcagaatcgtgtttgtaccacagtggctattgctatcgttgctgag
acttgcagccctttcacagtgttacccgcattgatgaatgaataccgagtacccgaatta
aatgtgcaaaatggagtattgaaatctttgtcgttcctatttgaatatatcggcgagatg
ggcaaagattatatttacgctgtcagtccattgctagaagatgcacttatggacagagat
ctagtacacagacaaaccgcctgcgccgctattaaacacatggcattaggtgtctacgga
ttcggatgcgaggatgcattaatacatttattgaatcatgtatggccaaacgttttcgag
acttcaccacacttagttcaagcatttatggacgctgtagacggattacgtgtcgcgctt
ggaccaattaaaattttacagtatacattacagggtttattccatccagctcgtaaagtt
cgcgacgtctattggaagatatacaattctctttatatcggtggacaggatgctctcgtg
gctggttatcctcgcatcatgaatgatccaaagaatcaatacattagatatgaattggat
tatatattgtaa

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