Pogonomyrmex barbatus (red harvester ant): 105433342
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Entry
105433342 CDS
T04903
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein Dscam2
KO
K06767
Down syndrome cell adhesion molecule
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pbar04515
]
105433342
Cell adhesion molecules [BR:
pbar04515
]
Immunoglobulin superfamily
DSCAM family
105433342
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
ig
Ig_DSCAM-DSCAML_C
Ig_2
Pur_ac_phosph_N
V-set
C2-set_2
Ig_5
Sp38
Interfer-bind
C2-set_3
Motif
Other DBs
NCBI-GeneID:
105433342
NCBI-ProteinID:
XP_011646917
UniProt:
A0A6I9WUD9
LinkDB
All DBs
Position
Unknown
AA seq
1538 aa
AA seq
DB search
MQPGPSVSLKCIAMGNPTPHFSWTLDGFPLPQNDRFMIGQYVTVHGDVISHVNISAVRVE
DGGEYRCSAVNRVAKAHHAARLNIYGLPHVRAMGNYAAVAGETTVIKCPVAGFPIASITW
EKDGQILPTSRRQEVSANGTLVLHRVDSSTDPGAYTCTAKNKQGRSDSQTIHIEVKVPPT
IAPFSFKKDLSEGLRAQVTCMVEKGDPPFTIIWSKDGEPISASGTAAAAAATINDLRQHS
QIPPGLRVTNIDAHSSAIVIERVTAAHTGNYTCLARNSVAEVLWTAELIVRVPPRWVVEP
QDARASEGMPRLSLHCHADGFPPPSITWRRGTGKNPGNYHDIASHEHAQDYKIHSNGSLV
FARVQEDHEGFYVCEAVNGIGAGLSKVVYLTVNVPAHFVEKHRNQTARLGSNASLRCEAK
GDHPLKIVWKKAGSQLDPKLPDYRYTLKEDNTTDGVISVLGFVSTSREDSGRYFCIASNA
YGRDEMTIHLYIQEPPDFPRNLHVIEKGSRHINLGWTTSQDGNSPITQYIIEYKTESEVW
HDHTFHTTVPGTRARGHVSGLRPAVTYQFRMYADNELGRSQASDILEATTEGEKPGGPPR
NLKVDPISSTEFNVTWDPPDHDLWNGEILGYHVGYKDHRMGAEQYTYKTVERRISTASVA
LGLARTSMPGRQYHLTNLKKYTRYSVVVQAFNALGPGPMTQEVTTSTLEDVPSSPPQDVR
CTALSSTSLQVSWDSPPELSMNGVPNGYKVMWENMDALVESVKPEMKITTALTMVIHGLE
KYTNYSVQVLASTRAGDGVVSSPLYCVTEEDLPEVPAGVKAVASSATSIIVSWQPPLKSN
GNITAYNVHIRGLGPEGKWHRRALPPYQTSYQAEDLHKRSQYEFTIAAVTSVGEGPQTPS
ITVSPSSEVRAAIYSFGTTLVVPWKQDVTLPCQSVGKPDPTVIWKQWGQIVKSSARVSLH
LDGSLQIIELHREDSGNYTCFVENRHGSDQITHRLTVQVPPAAPLLHATSTSSNSINVQW
KNGDDGGSPIRGYILHYKRESGEWEEFKVSHKVSSFVLSRLWCGNDYQMYLTAFNRIGMG
RPSEIVKATTKGSKPDDSPGTGDKFVTVNVSWITLHLNIWNDGGCPITFFELEYRKNGES
IWTLVSNNIEVQKTYTLSELQPGTTYDIRIRAHNNAGSSVAEYKITTLQPHISTTMSAIE
IDHYIPQHTSVYSDLKLIVPLVLSSFAVIAAAGAVFYCFRKRPFMGDIGSLHDAQTAAAL
DNKQNMEQREQYYATVRKPLRSPIHEMATLEKIPEYSEDIYPYATFQLEESVPAGGDSRC
NSAAPLQTFVYHDPRLSTADTLQLRESDCNRYTKVRGGRSSSAPLHKAHKVSQGKSESEE
YDTLXXXXXXXIYNEIHREVARALRFMFGELKVRDKRLLTDFLYHGPESSTSTEPSPIFE
RKSFPGRGRPKMLQLARHTSEEARANFGPIAGSGHPKHQSGNTYANRDQERDGSGNLFVP
KLDPPSGFSDAFELSEAECDFDRGHNSQRNVRDFVIAV
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgggtccctcggtgtcgctcaagtgcatcgcgatgggcaaccctacgccgcac
ttctcctggacactggatgggtttcctcttccgcaaaacgacagattcatgataggccag
tacgtgacagtgcacggcgacgtgatatcccacgtgaacataagcgccgtgcgagtggag
gatggtggcgagtacaggtgctcggcggtgaatcgcgtcgcgaaggcgcatcacgccgct
cggctcaatatttatgggctgccccatgtgcgtgcgatgggaaactatgccgctgtggcc
ggcgaaacgactgtcatcaagtgtcccgtcgcaggcttccccattgcctctatcacctgg
gaaaaagatggtcaaatattaccgactagccgacgtcaggaggtgtctgcgaatggcacg
ctggtgctgcatcgtgttgacagcagcaccgatcccggtgcgtacacgtgcaccgcgaag
aacaagcaaggtcgctccgactcgcagaccattcacatagaagtcaaagttccgcccacg
atagccccttttagctttaagaaggacctgtcggagggtctgcgagcccaggtgacctgc
atggtcgagaagggcgatccgccgttcacgatcatctggtcgaaggacggcgagccgatt
tccgcctccggcacggcggccgccgctgccgcaaccattaacgatctccgacagcactcg
cagataccacctgggttgcgcgtaaccaacattgacgcccattccagcgccatagttatc
gagcgcgtcaccgccgcgcacaccggcaactatacttgcctggcgcgcaattcggtggct
gaggtcctctggacggccgaattgatcgttcgtgtgccgccacggtgggtggtggagccg
caggacgcccgtgcgtcggaggggatgccccgactgagcttgcattgccacgccgacggg
ttcccaccgccgtcgattacatggcggcgcggcaccggcaagaatcccggcaattatcac
gacatagccagccacgagcacgcgcaggactacaagatacactccaacggctcgctggtg
ttcgcccgagttcaggaggatcacgagggcttctacgtgtgcgaggccgtgaacggcatc
ggagctgggctcagtaaagtcgtttacctcaccgtcaacgttcccgcacattttgtggag
aagcatcgtaatcagaccgccagattaggctcgaatgcctcgctgcgttgcgaagcgaag
ggcgatcaccctttgaagatagtctggaagaaagcaggttcccaattggatccgaagctc
cccgactatcgttacactctgaaagaagacaacaccacggacggcgtcatcagcgtcctc
ggcttcgtcagcaccagccgcgaggacagcggaaggtatttctgcatcgcgtccaacgct
tacggccgcgacgagatgacgattcatctttatattcaagagcccccggattttccacgg
aatcttcacgtaatcgaaaaagggagtcgtcacattaatctaggttggacgaccagtcaa
gacgggaatagtccgattacgcagtacataatcgagtacaaaaccgaatcagaggtatgg
cacgaccacacgttccatacgacagtaccggggacacgtgctcgcggccacgtgagcggt
ttgcgtcctgcggtaacttaccagttccggatgtacgcggacaacgaattgggtcggagt
caagcgagcgacattttagaggcgacgacagagggggagaagccaggtggaccgccgcga
aatctcaaagtagacccgatcagctcgaccgagttcaatgtcacctgggatccgcccgat
catgatttatggaacggcgagatactcggttatcatgtcggctacaaggatcacaggatg
ggagcggagcagtacacgtataaaaccgtggagagacggatctcgacggcgagcgtcgct
ctgggtttggcaagaacgtcgatgcctggacgtcaatatcacttgacgaacttgaagaag
tacacgcgttacagcgtggtcgttcaagcgttcaacgccctcggacctggtcccatgacg
caggaagttacgacttcgacactcgaggacgttccgagcagtcctccgcaagacgtgcgt
tgtaccgcgctctcatcaacgtccttacaagtctcctgggattctccacccgaactcagc
atgaacggagttccgaacggttacaaggtcatgtgggagaatatggacgcgctggtggag
tccgtgaagccggaaatgaagatcaccaccgctctgacgatggtgatccacggcctggag
aagtacaccaactattcggttcaagtcctggcgtccaccagagccggcgacggtgtcgtc
tcgtcgccgctttattgcgtaaccgaagaggacttaccggaagtgccggctggcgtcaag
gcggttgccagctcggccacatccatcatcgtctcctggcaaccgcctctgaaaagtaac
ggtaacattactgcctacaacgtacatatccgcggattgggaccggaaggcaagtggcac
aggagggctctgccgccgtatcagactagctatcaggccgaggatcttcacaagaggagt
caatacgaattcacgatcgcggcggtcacctcggtcggcgagggcccgcagaccccgtcc
ataacggtttcaccctccagcgaagtccgtgccgctatatactccttcggcacaacactt
gtcgtaccgtggaaacaagatgtgacgctgccttgtcaaagcgtgggcaagcccgaccct
acggttatctggaagcaatggggtcagatagtcaaatcatccgcgagggtgtccctccat
ctcgacggatccttgcagatcattgagcttcacagggaggatagcggaaattacacttgc
ttcgtggagaatcgccatggctccgatcaaataactcatcgtttaaccgtgcaagtgcca
cctgcggcgccgttattacacgcgaccagcacgagcagcaattcgatcaacgtgcagtgg
aagaacggtgacgacggcggttcgccgatccgtggctacatcttacactacaaacgcgaa
tccggcgagtgggaggagttcaaagtgtcgcacaaagtgagcagcttcgtcctgtcgcga
ctctggtgtggcaacgactatcagatgtacctgacggcgttcaatcgcatcggcatgggc
agacccagcgaaattgttaaggcgaccactaagggctcgaagccggatgattcgcccgga
accggcgacaaattcgtcacggtcaatgtttcgtggatcaccttgcatctcaacatatgg
aacgacgggggatgccctataactttcttcgagctcgaatacagaaagaacggcgagagc
atctggacgctggtttcgaataatatagaggtgcaaaagacatacactctaagcgaatta
caaccagggaccacttatgacattcgcataagggctcacaacaatgccggctcgtcagtc
gccgagtacaagataacgacgttgcaaccacacattagcacgaccatgtccgccattgag
atcgatcattacattccccagcacacctccgtgtactcggatctaaagctcatcgtacct
ctggtgctaagttcattcgcggtcatcgccgcggccggtgctgtcttctactgcttccgc
aaacgtccgtttatgggcgacattgggagtttgcacgatgcgcaaaccgcggccgcctta
gacaataagcagaacatggagcagcgcgagcagtattacgccaccgtacgtaagcctcta
cgatcgccgatacacgagatggccaccctcgaaaaaataccagaatattcggaagatatc
tacccgtacgccacgttccagctggaggaaagcgttcctgcaggaggcgacagccgctgc
aattctgccgcgcctcttcagacctttgtctatcacgaccctcgtctctccaccgccgat
acccttcagttacgagagtcggattgcaaccggtacactaaggtgcgcggaggccgttcg
tcctctgcgccgttgcacaaagcgcacaaggtcagtcagggcaagtccgagtcggaggag
tacgacaccctnnnnnnnnnnnnnnnnnnnnagatatacaacgaaattcatcgcgaagtc
gcgagagcactgcgatttatgtttggtgaattaaaagtaagagacaaacgtttgcttaca
gacttcctgtaccatggaccagaatctagcacgtctacagaaccctcaccgatttttgag
agaaaatcgtttcctggaaggggaagacccaagatgttacagctggcgcgtcataccagc
gaggaggcccgtgccaacttcgggccaatcgccgggtctggccatcccaagcaccagtcg
ggcaatacctatgccaatcgggaccaggagcgtgacggatcaggaaacctgttcgtcccc
aagctggacccaccctcgggcttctccgacgcgtttgagctaagcgaggccgagtgcgac
ttcgatcgcggtcacaacagccaacgaaatgtccgtgacttcgtaatcgcggtgtaa
DBGET
integrated database retrieval system
