Pogonomyrmex barbatus (red harvester ant): 105433425
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Entry
105433425 CDS
T04903
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin-protein ligase E3B
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105433425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pbar04121
]
105433425
Enzymes [BR:
pbar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
105433425
Ubiquitin system [BR:
pbar04121
]
Ubiquitin ligases (E3)
HECT type E3
105433425
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
DUF7462
PPP1R21_helical
Motif
Other DBs
NCBI-GeneID:
105433425
NCBI-ProteinID:
XP_011647061
LinkDB
All DBs
Position
Unknown
AA seq
1020 aa
AA seq
DB search
MFCAEGSSSKGSFLQQKKAAREDRAHEKRREAAATLIQAHVRAWLARVQFTKRILEEFDN
NFLDDIGVDNASVELKPALEVYRIISRFLLIYKKERDQERIERVCRYLVLTLDSESPKIS
YVGVALNKDHYISWISQMKTILYHCLSGLDGLKPERVSDHKSILLRLHTLVSFTSPGTWA
IQKVKGMDQLKTGMSQLCANIMGHLVNNGFYATMQTLLMKGLGRAKIALKPVTLSAAVTL
TLRPLISSQMSDKLVSLFLINIFSVPALVYHLNILSPECISSFITNNLFARSLELLNSEQ
NLRIVFNALEGSYALCLLANLIQLANIEREEVLRELCFPSFTFVVTRMLEACQQYVVAKR
SNLTHWHPVLGWFAQTIDTSLQDATPSVKLQLACLWTGRIVTHLIEQPLTEFVEKEVPPP
VEQQSTSSMGANIFRRAFLEARTNRNNSTKNYRKLGSPEATKIALICSLYQTALHTLTQM
KIEILTGLCYQGKILYHMWLFLTTLGPHCGLKAFLDLLAANTKCTAPEFQMLILFADCMT
HYVTILDDMEMYEHQDPFKLTDFITMSYFLNQFLYKAVLTNLFDVKSVSSNPLFISLYIL
LMAIYRRDCRRTFCPEGHWLAKEVRVSGFLADLEKGRRGAALLLSKMPHVIPHSERVVLF
RKHIADEKAVMGLTESACNSPPTTLIVVHRSIYFIYFILSNLFKATSETXLYPSPTSFMQ
DNHLQLFEFVGRMLGKAVYEGIVVDVPFASFFVSQFSGQTGGALYSWLDELASLDRDLYR
SLTLVKHYKGDIRQLELTFSLDEDVLGKLVTHELIPGGRTTAVTNQNKIQYIHHMAHYRM
YHQIKEQTTAFIKGFRSIINPEWLSLFSTPELQRLISGDNVPLDLRDLRKHTQYYGGFHD
SHRVVCWLWDILEKDFTEEERGLFLKFVTSCSKSPLLGFAHLEPPFSIRCVEVCDDEDTG
DTIGSVIRGFFTIRKKDPQNRLPTSSTCFNLLKLPNYQKKSTLREKLRYAVTSNTGFELS
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgttttgtgcggagggctcgtcgtcgaagggcagcttcctgcaacagaagaaagccgcg
cgcgaggatcgggctcacgagaagcgcagagaggccgcggccactttgattcaggcccac
gtccgagcctggttggctcgcgtccagttcaccaagcgaatactagaagaatttgataat
aatttccttgatgacatcggtgtggataatgcatcagtggaattaaaacctgctctagag
gtgtatagaattatttcaagatttttgttaatttataagaaagaaagagatcaagagaga
atcgagagagtgtgtagatatcttgtgctaactctcgattccgaatctccaaaaatatct
tatgtcggagtggcattaaacaaggatcactacatatcatggatatcccaaatgaagacc
attttataccattgtctctccggtctggatggcctgaagccggagagagtatcggaccac
aaatccatattgctccgactgcatactctggtgagttttacatcgccaggaacatgggct
atacagaaagtgaagggcatggaccaattgaagactggcatgagccaactgtgcgcaaat
ataatgggccatctagttaacaatggattttatgctactatgcagactcttttaatgaag
ggattaggtagagcaaaaattgctttgaaaccagttacactttcagcagcggtcactctg
acattgaggccactgatctcttcacaaatgtctgacaaattggtatccctgttcctaatt
aacatctttagcgtcccagctctggtttatcacttgaatattttgtcaccggagtgcatt
tcgtcgttcataacaaataatctgttcgcgagaagtttggagttgttaaattccgaacag
aatttaaggatcgtctttaatgctttggagggcagttatgcgctttgtttgctcgcaaat
ttaatacaattagcgaatattgagagggaagaagtattaagagaactctgctttccttct
tttacgtttgtcgtaacgagaatgttggaagcatgtcagcaatatgtagttgccaaacgg
agtaatttgacgcattggcatcctgtattaggctggtttgcacagacgattgacacgtcg
ttgcaggatgcgactccttcggtaaaattgcaacttgcttgtctttggacgggcagaatt
gttacgcatttaatcgaacagccactgaccgagtttgtcgaaaaagaggtaccacctccg
gtagaacaacaaagtacctcttctatgggagccaatattttccgacgtgcgtttcttgag
gctcgtaccaacaggaacaacagcactaaaaattacagaaagctgggcagtccggaggct
accaagatagctttgatctgctcgctatatcaaacggcattacacacgcttacgcagatg
aagatcgagatattgaccggattgtgctatcaaggcaaaattctttatcatatgtggttg
tttctcaccaccctggggccgcactgcggtttgaaagcgtttctagatctcttggcggct
aatactaagtgcacggcacctgagttccagatgctgatactattcgctgattgtatgacg
cactacgtgaccatcttggacgatatggaaatgtatgagcatcaagatcccttcaagctt
acagactttatcactatgtcgtactttctaaatcagtttttgtacaaagcagttctcact
aatttattcgatgtgaaatccgtatccagcaatcctctatttatttcgctttatattctt
ctaatggcaatctatcgacgcgattgtcgcagaacgttttgtccagaaggtcattggttg
gccaaggaagtacgagtatccggcttcttggccgatttggaaaagggaagacgcggtgct
gcgcttttactttcaaaaatgcctcatgttatccctcattctgaacgagttgtattattt
cgcaagcacatagctgatgaaaaagcagtgatgggtttaactgagagcgcttgtaacagt
ccaccgaccactctcatcgtcgtacataggtctatatattttatttattttatactctct
aatttgttcaaagccacaagcgaaaccnngctctatccatctcctacatcttttatgcag
gacaatcatttgcaactgtttgaattcgtcgggcgaatgctcggcaaagcggtttacgag
ggcattgtcgtggacgtgccttttgcgtcattctttgtgtcgcaattttccgggcaaaca
ggcggtgcattgtacagttggctagacgagctcgcttcgttagatcgcgatctttaccgt
agcctgaccttggtaaaacattacaagggcgatatccggcaactggagttgacattctct
cttgatgaggacgtactcggcaaactggttacgcacgagctgattcctggcgggcgtacc
actgctgtgaccaatcaaaacaagattcaatatatccaccatatggcgcattatagaatg
tatcatcagatcaaggagcaaacgaccgccttcatcaaaggattccgctccatcattaat
cccgagtggctgtcgttattctcgacgcccgagttacagagattaatttcgggcgataat
gtacctttggacctgcgagatttacgaaaacatacacaatattatggtggatttcatgat
agtcatcgggtggtatgctggttgtgggatattttggagaaagattttacagaagaggaa
agaggcttattcttaaagtttgtgacgagttgctcgaagtcacctttgctgggtttcgct
catctggaaccgcctttctctatacgatgcgtggaagtctgtgatgacgaggacaccggc
gacactatcggcagcgtaatcaggggtttctttacaatccgcaagaaggatccacagaat
cgattgcccacttcatcaacgtgctttaatctgctcaagctaccaaattatcaaaagaag
agcacgttgcgagaaaaacttcgctatgctgtcactagcaatactggtttcgaactctcg
taa
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integrated database retrieval system
