Pogonomyrmex barbatus (red harvester ant): 105433516
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Entry
105433516 CDS
T04903
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105433516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbar03021
]
105433516
03036 Chromosome and associated proteins [BR:
pbar03036
]
105433516
Transcription machinery [BR:
pbar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105433516
Chromosome and associated proteins [BR:
pbar03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105433516
PBAF complex
105433516
GBAF(ncBAF) complex
105433516
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_1
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
Motif
Other DBs
NCBI-GeneID:
105433516
NCBI-ProteinID:
XP_011647178
UniProt:
A0A6I9X3I3
LinkDB
All DBs
Position
Unknown
AA seq
1023 aa
AA seq
DB search
MLSLGPKKDGGPNAKFFEAPEILTQLDGVKQWLLKNCKKYVQTDPPTNKSLATLLVQLLQ
FQEDNLGKNISKPPMTRLPMKCFLDFKPGGGVCHILATAYRFKQEQGWRRFDFPGGKSGS
RMDRTVDMLMAAERALIQNRCMTVPSIFVRPDVDKNTAAKVKDVVRKHQGTVVENEADAT
HIIYPPVDPLEEEYARPCMRRERSVLIHWYYFPDSYDSWLTLDLPWDYPEGAYTNTNSRS
MYKVSATWALDLEQYNEWMNEEDYEVDDNGQKRVHKYRLSVEDLMAQPSHPPPAKKPKRK
RSPSPPPKLGKRKSSRAPSGIQSASSASSATAPKKSRGGEEEEDLTQGMEDPPAEPRIVE
VVATPTNPPITGQSNATTGNSTLASTGNKKQDSELQPLKSGNLTDLDEQMEGDKGSSQGG
QDREERDTSKERGEGGKGDEPEDNVTEQTHHIVVPSYSAWFDYNSIHTIEKRALSEFFNG
KNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINY
QVDAESRPTPMGPPPTSHFHVLSDTPSGLAPVNPNPPKTPQPSAAKMLLDLEKKPTSGTG
ALGTEEKVSAGAMANFGLKIDQYSRKPAVLKNKQAAGATRDWTEQETLLLLEGLELHKDD
WNKVCEHVGSRTQDECILHFLRLPIEDPYLEEGGPEGLGPLAYQPVPFSKAGNPVMSTVA
FLASVVDPRVAASAAKAAMEEFAAIKDQVPAALMDQHLRNVQASASDGKFDPAAGLAQSG
IAGTGPPEPPDDTATTASTTSSVPTGAASSPHSTASIAEAKKEEQDKSKDAMEVEPSQVD
VTKKEDESKEGEEDAKSTDPEAAEAKEKKDKVVRDAQLQSAAAAALAAAAVKAKHLAAVE
ERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLK
AAEFRARQQAHQRLAQEQQQQQQQQNQHPPWQPPGTQQQQQQPPSPQAQPQQQPPPHTPP
QQT
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgctaggcccgaaaaaggacggcggacccaacgccaaattcttcgaggcaccg
gagattcttactcagcttgacggtgttaagcagtggctgctcaagaactgcaagaagtat
gtacaaacggatccgcccactaataagagcttagccacattgttggtacagcttctgcag
ttccaggaagataatctcggaaaaaatatatcaaagccacctatgactaggcttccaatg
aaatgcttcctggattttaagcctggtggtggtgtatgtcatatattagctaccgcttat
cgttttaagcaagagcaaggatggcgacgctttgattttcccggggggaaatcgggatcc
cgtatggatcgtacagtggatatgctgatggcggcagaacgtgctttaatacagaataga
tgtatgactgtaccaagtatttttgtgagaccagacgtcgataaaaacacagctgcgaaa
gtaaaggacgtagttagaaagcaccaggggaccgttgtagagaatgaggcagatgctact
catattatctatcctccagtagatccattggaagaggaatatgcgcgtccctgtatgaga
cgcgagcgatcagttctaattcactggtactactttccagacagttatgactcttggtta
acattggatcttccatgggattatcctgaaggggcttatacaaatacaaattcaagatca
atgtataaagtatccgctacgtgggcgttagacttagagcaatataacgagtggatgaac
gaggaagattacgaagtagatgacaacggtcagaagagagtacataaatataggctctcg
gtggaagatttgatggcacaaccgtcccatccgccacccgcaaagaaacctaaaagaaaa
cgatcacctagtccacctccgaagctcggcaagcgtaaaagtagtagagcaccgtcgggt
attcaaagcgcttcctctgcgtcatcagcgacagctccgaagaaatcgcgtgggggtgag
gaagaggaagatctgactcaaggaatggaggatccgcctgccgagcctcgaattgtcgag
gtagtcgctacgcccacgaatccaccgatcacaggtcaaagtaatgcaacaacaggcaac
tccactttagcgtctaccggtaataaaaagcaggatagcgagctgcaacctctcaaatcc
ggcaatttaactgatcttgatgaacaaatggaaggagacaaaggaagctctcaaggtggt
caagatagagaagagagagatactagcaaagaaagaggagaaggtggtaagggcgacgaa
cccgaggacaatgtgacagagcaaacgcaccacattgtcgttcctagttactccgcctgg
ttcgattataattcgattcacacgatcgagaagagggctctatcagaattttttaatggt
aaaaataaatcgaagactccggaaatctatcttgcgtataggaattttatgatcgatacc
tatcgattaaatccaacggaatatattacatcaaccgcctgcagacggaatttagctggg
gatgtatgtgcaatcatgcgcgtgcatgcatttttggaacaatggggactcattaattat
caagtagatgcagaatccagaccgacgccaatgggacctccaccgacatcgcatttccat
gttttatcagatacaccgtccggtttggcaccagtcaatccgaatccgccgaaaacgcca
cagccatctgctgcaaagatgttacttgatttagagaagaaaccaacgagcgggacgggc
gctttaggtacagaggagaaagtttcggcaggcgcaatggcaaatttcggtctgaagatt
gatcaatattcgagaaaaccagcagtattgaagaataaacaagcagcgggcgctacgcgt
gattggacagaacaggagacgcttctgttattagagggattagaattacacaaggacgac
tggaacaaagtatgcgagcatgtcggttcaagaacgcaggatgaatgtatcttgcacttc
ttacgtttacctatagaggatccatatctggaagagggcgggcccgaaggattaggtcca
ttggcttatcaaccagtaccattctcgaaagcaggtaaccccgttatgagtacggttgct
ttcctagcatcggtcgtagatcccagagtagccgcaagcgcggcaaaggcagctatggag
gaattcgctgcgataaaggatcaagtaccggctgcattaatggatcagcatttaagaaac
gttcaagctagcgcatcagacggtaaatttgatccggctgcaggcttagcgcaatcaggt
attgccggcacaggaccgcccgaaccgcctgatgacacagcaactactgcgtcaacaacc
tcgtctgtaccgacaggcgcggctagctctccgcattccacggcgtcaattgccgaagcg
aaaaaagaggaacaagataagtctaaagatgccatggaggtcgaaccatctcaggtggat
gtcacgaagaaagaagatgaatctaaggaaggtgaagaggatgcaaaatccaccgatcca
gaagccgctgaagcaaaggagaaaaaagacaaggtcgtgagagacgcccaactgcaatct
gctgcagcagcggcactagctgctgcggctgttaaggctaaacatttagcagctgtcgaa
gaacgcaagatcaaatcacttgtcgcgttactagtcgagacacaaatgaaaaagttggag
atcaaactgcgtcactttgaagaattagaaaccacgatggagcgcgaacgggaaggactc
gagtatcaacgacagcagctcatcaccgagcgacagcaatttcatctggagcaactgaaa
gcagccgaattcagagcacgtcagcaggcccaccaacgattagcacaagagcaacagcag
caacaacaacaacagaatcaacatccaccctggcaacctcccggtacacagcagcaacaa
caacagccaccgagtccgcaggctcaaccgcaacaacaaccaccaccgcacacgccgcca
caacaaacataa
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