Pogonomyrmex barbatus (red harvester ant): 105433707
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Entry
105433707 CDS
T04903
Name
(RefSeq) structure-specific endonuclease subunit slx1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
105433707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbar03400
]
105433707
DNA repair and recombination proteins [BR:
pbar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
105433707
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
T5orf172
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
105433707
NCBI-ProteinID:
XP_011647436
UniProt:
A0A6I9X464
LinkDB
All DBs
Position
Unknown
AA seq
270 aa
AA seq
DB search
MEEEPEVIEHFFGVYLLYCMNPKYKGRTYIGYTVNPRRRIKQHNAGKKHGGAWKTSKRGP
WNMVLIVYGFPNSTSALRFEWAWQHPHVSRRLKHIPKKKSSQKTFDFHLTILSEMLKIGP
WYRLPLTIRWLDHKFFENYHERISPPLHMPICYGKVTNCKVKHTQKINDDILLQESHLLI
KESLMFCSLCGSSVMEKNSVTCVKPKCLLIAHLICLAKEFCKDEMILPIEGTCPSCRTIV
LWGDLIKKRNGCYQDFEEINSNFSSDKDDI
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagagcctgaagtgatagaacacttttttggcgtttatttgctgtattgtatg
aatccaaaatacaaaggaagaacttatataggttataccgtaaatccgagacgcagaatt
aagcaacataatgctggtaaaaagcatggtggagcttggaaaactagtaagagaggacca
tggaacatggtcttgattgtctatggattccctaacagcacttctgcacttagattcgaa
tgggcttggcaacatccacatgtaagtagacgattgaaacacattcctaagaagaaatca
tcgcagaagacgtttgatttccatttgacaatcttgtctgagatgttgaagattggacct
tggtatcgtctacctttgacgatacgttggttggatcataaattctttgagaattatcac
gaacgcatatctccaccgttacatatgccaatatgttatggcaaagtcactaattgtaaa
gttaagcacacacaaaaaataaatgatgatattctattacaagaatcacatttgttaata
aaagaatcattgatgttttgttctctatgtggctcgagtgtaatggaaaaaaattctgtc
acctgtgtaaaaccaaaatgccttttgattgcccacttaatttgtttagcaaaagaattt
tgtaaagatgaaatgattttaccgatcgagggcacttgcccttcatgcagaactattgtt
ctatggggagatcttattaaaaaaagaaatggttgttatcaagattttgaagaaattaac
agtaatttttccagtgataaagacgatatttaa
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