Pogonomyrmex barbatus (red harvester ant): 105433903
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Entry
105433903 CDS
T04903
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pbar01009
]
105433903
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbar03019
]
105433903
Protein phosphatases and associated proteins [BR:
pbar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105433903
Messenger RNA biogenesis [BR:
pbar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
105433903
mRNA cycle factors
Stress granule specific factors
105433903
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
Staufen_C
Motif
Other DBs
NCBI-GeneID:
105433903
NCBI-ProteinID:
XP_011647694
UniProt:
A0A6I9WY30
LinkDB
All DBs
Position
Unknown
AA seq
803 aa
AA seq
DB search
MLRHHHAMQNQLRDHNNRMAGPMRPMQQANMPQLRQPQHLLPHQNPHQQILSMPPHQQHM
HHMQHPGPPHGNPRQPMLMGMSTHNTNSTMVSVSMKDQANTVSVTLQNVQQPQYPHQQQP
QQQQPNQQNQSPQQPQPPQQQVQQSQSQQQPQHVPQQSNVEQSKAVTNDVGGESRDDNSS
NQNHTNATNPALANMKEKTPMCLLNELARFNRIQHQYRLTNEQGPAHKKRFTVTLKLGEE
EYVAEGPSIKKAQHSAATEALTKTWYRQPPPKPTKAMRIGHLGKCPSGSGHLPPTVELNA
LAMKRGEPTVYTFRQAPPAALQHQFMPHGFGNFPRMYNPRLTYNRGVHTDLQGLYLVTLK
VGEREFTGRGLTGQAARHDAASRALEQLRQLPLPEEIANTNNINENGTLSGIDDPNAELK
SPVSLVHETALKRGLPVSFEVVSESGKPHIRTFMTKCTVGDKITVGEGSSKKVSKKRAAE
LMLDELKRLPPLPTTIQNRSMRVKRKPPATKKKSRNLIKVYQEPRSENEAAEEVNPVSRL
VQIQQAKREREPIYNLIDEKGAPRRREFVMEVTMGQHSAQGIGPNKKLAKRAAAEALLTQ
LGYSKPSPQPAKPSIKTGESENTESKPRKVTFLEDEQMNDTQPHSVGGTIGRQLVPGLLL
VDGGQESKLGNGPSVQIVAEELREQQQQNTAGVSPKDQLHYLSQLFNFSVEFSDFPKGVS
INKEYLSLVSLSTDPPQVCHGNGATITASRNQAALRALRTLSKLGLDNASNAAQVKKDKG
ASGDGIHISIQVKNNIMDGAIDK
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgttacgtcaccatcacgcaatgcaaaatcagcttcgagatcacaataacagaatggca
ggaccgatgcggcctatgcagcaggctaatatgccccaattacgacagcctcagcatttg
ctgccacatcaaaatcctcatcaacaaatactgtccatgcctccccatcaacagcatatg
catcacatgcagcatcccggtccgccgcatggaaacccaagacaaccgatgttgatgggc
atgagtacgcacaatacaaacagtactatggttagcgttagcatgaaggatcaagcaaat
actgtttctgtgactcttcaaaatgtgcagcaaccgcaatatccacatcaacagcaaccg
cagcaacaacaaccgaatcaacaaaatcaatctccccaacaaccacagccgccgcagcag
caggtacagcaatcgcaatcgcaacaacaaccgcaacatgtaccgcagcagtcaaacgtg
gagcaatctaaggcagtaacgaacgacgttggtggagagtccagagacgataattcgtcc
aatcagaatcataccaacgctaccaatccagctttggcaaacatgaaagaaaaaacacct
atgtgcttgttaaacgaattagcaagattcaataggatccaacatcaatatagattgaca
aatgaacaaggaccagcacataaaaaaagattcacagtgaccctgaaattaggtgaggaa
gagtatgtcgctgaaggtcccagtataaaaaaggctcagcatagcgcggcgaccgaagca
ttgacgaaaacttggtatcgtcaacctccgcctaagcccaccaaggccatgaggatcggt
catttaggcaaatgtccatcaggttctggacacttgccgcccactgtcgaattgaacgcg
ttagcgatgaaacgtggtgaaccaactgtttatacgttccgacaagctccaccagctgca
ttacaacatcagtttatgccacacggatttggtaattttccacggatgtacaatccgcga
cttacatacaaccgtggagttcatacggatcttcaaggactgtatcttgttacgctgaag
gttggcgaacgtgaatttacgggcagaggtttaacaggtcaagcagcacgtcacgatgca
gctagcagagctttggaacaattacgtcagttgccactaccggaagaaatcgcaaacact
aataacatcaatgaaaatggcacgttaagtggaattgatgatccgaatgctgaattgaag
agtcccgtatctctggtacatgagaccgctctgaagcgtggattaccggtcagttttgaa
gtcgtgtctgaaagcggtaaacctcatataagaacttttatgacaaaatgtactgttggc
gacaagattaccgtgggagaaggatcttcaaaaaaggtatcgaagaaacgtgctgccgaa
ttgatgttagatgaattgaagcgtcttcctccgttaccaactaccatacaaaaccgatca
atgcgagtgaaacgtaaaccgccagcgacgaagaagaaatctcgtaatctaatcaaagtg
tatcaggagccccgttcagaaaatgaggccgcggaggaagtcaatccagtttcccgattg
gttcaaattcaacaagcgaaacgagaaagggagccgatctacaatttgatagatgaaaag
ggcgcaccgagacgcagagagttcgttatggaagtgacgatgggtcagcattccgcgcaa
ggaattggacctaacaagaaattagctaagagagctgcggctgaagctcttttaacacaa
ttgggatatagcaaaccatcgccacaacccgcaaaaccatctataaaaacaggagaaagc
gaaaacacggagtcaaagcctagaaaagttacgtttctcgaggacgaacaaatgaacgac
actcagcctcactcggtaggaggtaccataggtcgccagttagtacctggtcttttattg
gtggatggaggtcaagaatctaaactggggaatggacccagcgtacaaatagtcgctgaa
gaattgcgtgagcaacaacaacagaatacagctggtgtttcgcccaaggatcaattgcat
tatttatctcagttatttaatttcagcgtagaatttagcgattttcctaagggcgtatcc
ataaacaaggaatatttatcacttgtgtctctaagcaccgatccaccgcaagtttgtcat
ggtaatggggcgacaataactgcgagtcgcaaccaagcggctctaagagcgcttcgtact
cttagtaaattgggacttgataatgcctcgaacgcagcacaagtgaagaaagacaaaggt
gcgtctggtgatggaatacacattagcattcaagttaaaaataacattatggatggagct
atcgataagtaa
DBGET
integrated database retrieval system
