Pogonomyrmex barbatus (red harvester ant): 105433978
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Entry
105433978 CDS
T04903
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIP12
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105433978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pbar04121
]
105433978
Enzymes [BR:
pbar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
105433978
Ubiquitin system [BR:
pbar04121
]
Ubiquitin ligases (E3)
HECT type E3
105433978
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
ARM_ARMC5
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
105433978
NCBI-ProteinID:
XP_011647814
LinkDB
All DBs
Position
Unknown
AA seq
2073 aa
AA seq
DB search
MADQQDQLSSGGSVEKASASADTSKLRGKNSSSGSSGYRKRQSTGAIPDSVEEKRRRQIT
GDPQASQVDSNTAHAHSIDSSKGEGRIRGERRSHGASLESYPETDWRSHHKIHQASYSSS
SARVRSAARTSLPELNLTPTDCVASRTRSRTPQNPQALTQGTSSYDLSLPSGYGSRRTST
YNNLVASSSATSITSHPSTSRGRGGQRMSECLEGFVSAVKALFPISTQTYHQEDSKSHGA
TCNATSSSTSSQVLGVKSSIRVGNAASNSVESGGGALAHDGAGTSGIASTATANLPVSAT
VSANPTHPHSTHKHLLRSRAKASGEQPKELPSSNKTSSKHHKKDTTTGSCSSSRHRSSSR
VRKPVVESSSGGLGSVMSGNDSISATSVSSSIPSSQLVSTTGEEESASTATSATASGGPS
GMSGTTGDSESDDGEVGRLQALLEARGLPPHVFGALGPRMQHLLNRSMGASSAAKAQQLL
AGLQAVEDEGEQLQAVMNMGEILVMGNEDTLTGFPVKQVVAALINLLGIEHNFAIMTHAC
RALTYMMEALPRSSTVVVDAVPVFLQKLESIECMDVAEQCLTALAMLSRRHSKTILHAGG
VSACLKFVDFFNITAQRAALTITANCCQNLHPDDFHLVVDSLPLLTSRLTNQDKKSVECV
CQAFSRLVDSFQHDPVMLHKIINAELLQNLQQLLMITPPVNSTNNFITVLRMLSVISNRC
PDLAQLLLQQNIAFTLSYLLTGSLEVKTEDVELVPRTPQEWFEITCLIEELMPPLPTDGI
FSVNSLLERTSNQQETVQWEWRDERQCSHPFSTIDSRIIEMAFQNGEDEICLTSLGRTYT
IDLTVMKQINEDIGMARSIFRRVNANPTEGKSPTCSSSMDVVPPVIETNEWLVSFIRTLF
SVLYEVYSSSAGPAVKCKCLRALLRMVYYASTDLLKDVLKNQVVSSHIAGMLASQDLRIV
IGALQMASILMKRLPQVFGVHFHREGVLHQVRQLADPEVPLGVSPPKCPSGTSLPSPQPG
PSNTPLSSTTMLSSSSATSPVVSPSSNGNILFGAIASPCQYKPNISASLEPHRTELSNSV
EEASTPQSAHLRIGDVLKKKRQNKKGRFSRLGGATTPQQTQQPESLFTGFTPKNNRFLGN
LNPAKWGRKSSSSSTSSDKRDSSSSTNLSKPPSNPSLTGGNRDKAKAWVREQAAQFLARY
QDDAPCSHPALTVLARLTAAIQRLQSNELDEMLSALTELRDIVLESDISPFEMNYSGLIK
ALLNYLTTTDAPGNRYDRLRMFWKLFAESTMQQNNDIMDLNPGAFGALVTKLNSCVAQLE
QFPVKVHDLPAGSGAGRGGTSALKFFNTHQLKCNLQRHPDCNNLKQWKGGTVKIDPLALV
QAIERYLMVRGYGRIRDADSMVSDDDNSEDDIDDTLAAVVISQGPPKHKLQFLIGDVVLP
FNMTVYQAVRQFGCSGVDHSEAEADSEPPLGHDAVWVQTHTIYYRPVPEEDTVTSPKSGS
SSQGNSRKGKGKSTKISSKRKEDSLWLEGTVPLQHCPLAPYLSPILPPSVTITDASLDGL
CLLRLLHALNRHWGILFPHLKSMSLLSPQDFINNKIAAKASRQLQDPLVIMTGNLPSWLQ
QIASVCPFLFPFETRQLLLYATSFDRDRALQRLLDSAPELSGSDSQERVTPRLERRKRTI
SRTDILKQAEQVIQDLASNKALLEVQYVNEVGTGLGPTLEFYALVSKELQRADLDLWHGS
SNPTENGYVNSLNGLFPTPIPWTTKVSHLAKLKTKFKFLGKFMAKAIYDSRMLDLPFSLT
FYRWLLGEEHTLTLADLAYVCPDVYRTLSKLQEVVRKKEVMEKDQTLRPHEKVQLIEALD
LDMCPISELGLIFELPGYENIELRKGGSEISVTIHNLDQYIKLVVHWFLYEGVFRQMEAF
REGFESVFPPSQLRLFFPEELEAVFCGHAQTGGQWDVKTLAECCRTDHGYTPDSRAIRFL
FEVMSKYNSEEQRQFIQFVTGSPRLPVGGFKSLTPPLTIVRKTFDPSMKTDDFLPSVMTC
VNYLKLPDYTTLEIMREKLRIAAQEGQHSFHLS
NT seq
6222 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcaacaagatcagttgtcatcaggggggtctgtagagaaggccagtgcttca
gcagacacctctaaacttagggggaagaactctagtagcggctcgagtggctatagaaaa
cgacaaagtactggtgcaatcccagatagtgtggaagagaagaggcgtagacagatcact
ggcgacccacaggcatcccaagttgacagtaatacagcgcacgcacattcaatcgattct
tccaagggagaaggcaggatcagaggtgaacgaagaagtcatggagctagcttagaatct
tatccagaaaccgactggagatcacatcataagattcatcaagccagctatagcagtagt
agtgcaagggtgcgtagtgcagcaaggacgagtttaccagaattaaatttaacacctacc
gattgtgtggcatcgcgtactcgttcccgtacaccacaaaaccctcaagcattgacacag
ggaaccagcagttacgatctgtcacttcccagtggatacggtagccggaggacaagtacc
tacaacaacttagtagcttcatcaagtgcaacgtcgatcactagtcatccatccacatcg
agaggaagaggaggccagaggatgagcgaatgtctggaaggatttgtgtctgctgtcaaa
gcactttttccaatatcaacacaaacctaccatcaagaagattcgaaatctcacggtgcg
acctgtaacgcaacgagtagcagtacgagtagtcaagtcctgggtgtcaagtccagcatc
agagtgggtaacgcagcaagtaactctgtggagagtggtgggggggcgttggcacatgac
ggggcaggcacgagtggcatcgcgtcaacggccactgccaatctacctgtgtctgccacc
gtttctgccaaccctacacaccctcattctacacacaagcacctgctacgctctcgtgcg
aaagcttcgggtgaacaacccaaagaactgccatccagcaacaagacttcatcgaaacat
cacaagaaagacactacaacgggttcctgctcgagttctagacatcgctcctcatcacgt
gtgaggaagccagtggtggagagcagctccggtggattgggcagtgtgatgtcaggcaat
gactctatcagcgcaacatcggtatcatcctcaattccgagcagtcagttagtctcaacc
acaggtgaggaggagtcggcatcaactgcgacatctgccacagccagtggaggaccatct
ggaatgtcaggaacaactggtgatagcgagagcgacgatggagaagttggacgattacaa
gctttgttggaagctagaggtctaccacctcatgtgtttggtgcattaggtcctagaatg
caacacttacttaatagaagcatgggtgcaagttctgctgctaaggcacaacaattgcta
gctggcttacaagctgtcgaggatgaaggagagcaattacaagcagtaatgaacatggga
gagattcttgtaatgggcaacgaagatacactgactggttttcctgtcaagcaagtggtt
gcagctttaattaatttattgggaatcgaacataattttgcaataatgactcacgcgtgt
cgtgctcttacgtatatgatggaggcattgccacgatcgtctacagttgtagtggatgca
gtgccggtgttcctgcaaaaactcgaatcgatcgagtgtatggacgtagctgaacaatgt
ttgacagcattagccatgttgtcacgcagacacagcaaaacaattttacatgcgggtggg
gtatcagcctgtttgaaatttgttgattttttcaacatcacggcacaacgcgcagcgtta
acaattaccgcaaattgctgtcagaatcttcatcctgatgattttcacttagtagtggat
agtttaccattattaacgagcagattgacaaatcaagataaaaaaagcgtcgagtgtgtg
tgtcaagcattcagtcgattagttgacagtttccaacatgatcctgtaatgttacataag
attatcaatgccgaactcctacaaaatctgcaacaactgcttatgattacgccaccggtt
aacagcactaacaatttcataactgtattacgaatgctttctgtgatatcgaatcgctgt
cccgatttggcacagttgttgctgcaacaaaatatagctttcacattaagttatctccta
accggatctctggaggtcaaaacagaagatgtagagttggtgccacgtacaccacaggaa
tggttcgaaattacatgtttaatcgaggaacttatgcctccgttaccaacagatggaata
ttcagtgtaaatagcttactcgaaaggaccagcaatcaacaggagactgtccagtgggaa
tggcgcgacgaaagacaatgttcccatccgttcagtactatagattctagaattatcgag
atggcgtttcaaaatggcgaagacgagatatgccttacctctttaggacgaacttacact
atagatctgactgtgatgaaacaaattaacgaagatataggaatggcaagaagtatattt
cggagagttaacgccaatcccactgagggaaaaagtccaacttgctcatctagtatggat
gttgtgcctccggtaattgaaacaaacgaatggctagtgtcttttattcgaactttgttc
tctgtactatatgaagtttatagtagctcagccggtcctgccgtaaaatgcaaatgcctc
cgagctcttcttcgtatggtgtattatgcttcaactgatttacttaaggatgttctaaag
aatcaagtggtttcgtcacacatagctggtatgttagcatcgcaagatttacgtatagtt
atcggagctcttcaaatggcgagtatcctgatgaagagattgccacaagtgtttggggtt
cattttcatcgtgagggcgtactacatcaagttcgtcaattagcagatcccgaagtacct
ctcggtgtttcaccacccaagtgcccttctggtacatcattaccaagcccacagccaggt
ccgtctaatacaccactttcttccaccacaatgttgtcttctagtagtgccacgtctccg
gttgtctctccatcctcgaacggtaacatattatttggcgcaatcgcgtcgccatgccag
tataaaccaaatatcagtgcttcactggaaccacacagaacagaattaagcaatagcgta
gaagaagcaagtacacctcaaagtgctcatctaagaatcggtgacgtgctgaagaagaaa
cgacagaataagaagggtcgtttctcgagattgggaggtgccactacgccacagcaaaca
caacagccggaatctctatttaccggttttaccccgaagaataatcggtttttggggaac
cttaatccggctaaatggggccggaaatcatcctcgtccagcactagcagtgacaagaga
gactcgagttcgtccactaatctgtcgaaaccaccaagtaatccgagcttaactggtggg
aatcgagataaagctaaagcatgggtgcgtgagcaagcagcccaatttctggcgagatat
caggacgacgcaccttgctcgcatccggctttaacggttctcgctcgattaactgctgca
atacagcgattgcaatcaaatgaattggatgagatgttgtcagcactaacggaattacga
gacatagttcttgagagtgatatatcgccgtttgaaatgaattacagtggccttattaag
gctctgttgaactacctcactactacagatgcaccaggcaatcgttacgaccgtcttcgt
atgttttggaaattgtttgcggagtctactatgcaacaaaataacgatattatggatctt
aatcctggcgcgtttggtgctttggtaacgaagttgaatagttgtgttgcacagctcgaa
caattcccagtaaaagttcacgatttacccgcgggttctggcgctggacgtgggggcacc
agtgctctcaagttcttcaacacacatcaacttaagtgtaatcttcaacggcatccagat
tgtaataacttgaaacagtggaagggcggtactgtaaaaatagatcctcttgcgttggta
caagcaattgaacgttatttgatggtacgtggatatggcagaatacgggacgccgattcg
atggtcagcgatgacgacaatagcgaggatgatattgacgatactttggcggcagtcgtg
ataagtcaaggaccgcctaagcataaacttcagtttttaatcggcgacgtggttttgcct
ttcaacatgacggtttatcaagctgtcagacagtttggatgttccggagtggatcattcc
gaggcagaagccgatagtgaaccaccgcttggacacgatgcagtatgggtacaaacccat
acgatatattacagaccagtaccagaagaggataccgtaacttctccaaaatcaggatcg
agttcacagggtaatagcagaaagggcaagggaaaaagtacaaagattagttcgaagagg
aaagaagatagtctctggctagaaggcacggttccgcttcaacactgtcctcttgcgcca
tatttatcccccatcttgccaccctcggtaaccatcacagatgcttctcttgatggattg
tgtctattgcggcttttgcacgctctcaatcgtcattggggtatactatttcctcatctg
aaaagcatgagtctactgtcaccccaggatttcatcaacaataagattgctgcaaaagct
agcagacaactgcaagatccattggtgatcatgactggaaacttaccatcttggttacaa
cagatcgcatctgtttgtccttttctctttcccttcgagacgaggcagctcttgctatat
gctacgtcatttgatcgtgatcgagcgctgcaacgtctcttggattccgcgccagagctt
tcgggatcggatagtcaggaacgtgttacaccacgcttagagcgaaggaagagaactatt
tcgagaacggacattctcaaacaagcagagcaagtgattcaagacttagcctctaataag
gccttactcgaagtgcaatatgttaatgaggtcggtactggtctcggtccaactttagaa
ttctacgctctagtctccaaggaactgcaacgcgctgatttagacttgtggcacggcagt
tcgaatcccaccgaaaacggatatgttaattctttgaatgggctcttcccaacgccaatc
ccatggaccactaaagtatcacatctagcaaagttgaagaccaagttcaaattccttggg
aaatttatggcgaaggcgatatatgattccagaatgttggacttgccatttagtttaact
ttttaccgctggttactgggagaggagcatacgcttacattagcggatctggcgtatgta
tgtcccgacgtgtatcgtactcttagcaaacttcaagaggtcgtgaggaagaaggaagtt
atggaaaaagatcagacactgcgcccgcacgagaaagtgcaattaatcgaggctctcgat
ttagacatgtgcccgatttccgaactgggtcttatattcgaattgccgggttatgagaat
atcgaattgcgaaaaggcggcagcgagatatccgtaactattcacaacctggatcaatat
attaagttagtggtacactggttcttatacgaaggagtgttcagacaaatggaggctttc
cgggaaggtttcgaatcggtattccctccgtcgcaactaagattatttttcccggaagag
ttggaggcggtattctgcggccacgcacaaaccggtggacagtgggacgtgaaaactctt
gctgagtgctgcagaaccgatcacggttacacaccggattcgcgagccattcgttttctg
ttcgaagtcatgtctaagtacaacagcgaggagcagcgacaattcattcagttcgtcacc
ggttcgccacgcttgcccgttggaggttttaaaagcttaacgcccccgttaacaatagtc
cgcaaaacctttgatccatctatgaagacggatgattttctaccatcggtaatgacttgt
gttaattacctaaaactgcctgattataccactttggaaataatgcgggaaaagttgcgg
atagccgcgcaagagggtcagcattcgtttcatctctcctag
DBGET
integrated database retrieval system
