Pogonomyrmex barbatus (red harvester ant): 105433984
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Entry
105433984 CDS
T04903
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03030
DNA replication
pbar03410
Base excision repair
pbar03420
Nucleotide excision repair
pbar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105433984
03410 Base excision repair
105433984
03420 Nucleotide excision repair
105433984
03430 Mismatch repair
105433984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbar03032
]
105433984
03036 Chromosome and associated proteins [BR:
pbar03036
]
105433984
03400 DNA repair and recombination proteins [BR:
pbar03400
]
105433984
DNA replication proteins [BR:
pbar03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105433984
DNA Replication Termination Factors
ELG1-RFC complex
105433984
Chromosome and associated proteins [BR:
pbar03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
105433984
DNA repair and recombination proteins [BR:
pbar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105433984
Check point factors
HRAD17(Rad24)-RFC complex
105433984
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_lid_RFC1
AAA_22
RCF1-5-like_lid
AAA_16
Rad17
Viral_helicase1
nSTAND_NTPase5
Mg_chelatase
AAA_11
nSTAND3
AAA_assoc_2
AAA_18
RuvB_N
AAA_19
AAA_24
AAA_28
NTPase_1
RNA_helicase
ABC_tran
MeaB
DNAX_ATPase_lid
MipZ
AAA_5
AAA_3
AAA_23
ATPase_2
SLFN-g3_helicase
AAA_30
AAA_25
AAA_29
Motif
Other DBs
NCBI-GeneID:
105433984
NCBI-ProteinID:
XP_011647829
UniProt:
A0A6I9WUD8
LinkDB
All DBs
Position
Unknown
AA seq
350 aa
AA seq
DB search
MADDNVDEAMEIEVLPSTSNSDMKIKERDGKSVNLPWIEKYRPQVFSDIVGNEDTITRLS
VFAQHGNVPNIIISGPPGVGKTTTILCLARTLLGPAFKEAVLELNASNERGIDVVRNKIK
MFAQKKVNLSKGKHKIIILDEADSMTDGAQQALRRTMEIYSNTTRFALACNNSEEIIEPI
QSRCAMLRYGKLTDAEVLAKILEVCKKENISYTDDGMEAIVFTAQGDMRQALNNLQSTHN
GFNHVNAENVFKVCDEPHPLIVKDMLDNCIKGDVTKACTVMDHFWKMGYSAEDIIGNVFK
VCKNHVMDEKLKLKFVKEIALTHMGIVEGISSLLQLHALVAKLCRICISK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgataatgttgacgaagctatggaaatcgaagttttaccctccacgagcaat
agtgatatgaaaatcaaggaaagggacggaaaatctgtaaatttaccatggattgaaaaa
tatcgacctcaagtgttttccgatattgttggcaatgaagatactataaccagattatca
gtctttgctcaacatggaaatgttccaaatatcatcatttctggtccacctggagtaggt
aaaactactacaattttatgtttggctcgtactctattaggaccagcatttaaggaagct
gtacttgaactgaatgcttcgaatgaaagaggaatagatgtggttagaaataaaatcaaa
atgtttgcacaaaaaaaggtgaatctttcaaaaggaaagcataaaatcattattttagat
gaagcagacagcatgactgatggtgcgcaacaggcattacgtcgaacaatggaaatttat
agtaacacaactagatttgctcttgcatgcaataattcagaggaaattattgagcctata
caatcacgatgtgctatgttaagatatggaaaattaacggatgctgaagttttagctaaa
atcctcgaagtctgcaaaaaagaaaatatttcttatacagatgatggtatggaagcgatt
gtgttcacagctcaaggagatatgagacaagctttaaataatctgcagtctacgcataat
ggatttaatcatgtaaatgcagaaaatgtatttaaagtctgtgacgaacctcacccttta
attgtcaaagatatgttggataattgtataaaaggagatgttaccaaagcatgcacggtt
atggatcatttctggaaaatgggatattctgcagaagatataatcggcaatgtattcaaa
gtttgtaaaaatcatgttatggatgagaaactaaaactgaaatttgttaaggaaattgca
ttgacacatatgggaatagtagaaggtattagtagtttgttacagttacatgccctagta
gcaaagctttgtcgcatttgcatatcgaagtaa
DBGET
integrated database retrieval system
