Pogonomyrmex barbatus (red harvester ant): 105434010
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Entry
105434010 CDS
T04903
Name
(RefSeq) transcription factor Sox-21-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbar03000
]
105434010
Transcription factors [BR:
pbar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
105434010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Ccdc124
Motif
Other DBs
NCBI-GeneID:
105434010
NCBI-ProteinID:
XP_011647863
UniProt:
A0A6I9XP52
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All DBs
Position
Unknown
AA seq
315 aa
AA seq
DB search
MTRFVLNQDVSYDSCSGASLNLDASSNKFGFDMLPSHYPPMYYPFSNTISPDVTKAIRDT
GQQIPMQQEEHIKRPMNAFMVWSRQKRKEIAMENPKMHNSQISKILGATWKTLTDEDKTP
FVEQAKYLRSQHMKDYPNYKYRPRKKLKAGSAVKSVSGMCIPTRPCTSFPLSSVYPTPIV
TPPAIHHPLSYHPYHGTVHFKAANPNSPSTSATIADGNNNASLDSLYHFYSMSSTVGNAT
TLSHLNPLFSSSHHTLGANSLHSQLMFSPSPGPNSAVVNNYDTSISQSTSLPMQPPGTTS
TLDPDMFHRFDAYSQ
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgactagatttgttttaaatcaagatgtctcgtatgattcatgctcaggggccagtttg
aatttggacgcaagttcgaacaaattcggattcgatatgctcccatctcattatcctccg
atgtactatccgttttccaatacaatttcacccgacgtaacaaaggccataagagatacc
gggcaacagatacctatgcaacaagaggaacatatcaagaggcccatgaacgcgttcatg
gtgtggtcccgccaaaagcggaaggagatcgcgatggagaatccaaaaatgcacaattcg
cagatttcaaagatactcggcgcgacttggaagacactcaccgacgaggataaaacccct
ttcgtcgagcaggcgaagtatctgcgcagtcagcacatgaaggactatccgaattacaaa
tatcgacctcgaaaaaagttgaaagcaggttccgctgtcaagtccgtgtccggcatgtgc
atccctacgaggccttgcaccagtttcccactatcgtcggtttaccccacgccgatcgtc
actccccccgctatacatcatccgctgagctatcatccgtatcacgggaccgttcatttc
aaggcagcgaacccaaactcaccgtccacgtcggctacaatcgctgacggcaacaataac
gcatccttggatagtctatatcatttctactcgatgtcatcgacggttggtaatgcaact
acattgtcacacctgaatccgctcttctcgagcagccatcatacgttgggtgccaacagc
ctccattctcagctgatgttttccccctcgcccggacctaacagtgccgtcgtcaacaat
tacgatactagtatatcgcaatctacctcgttgccgatgcaaccccctgggacaacgtct
accttagatcctgatatgtttcatagatttgatgcgtactcacaatga
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integrated database retrieval system
