Pogonomyrmex barbatus (red harvester ant): 105434020
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Entry
105434020 CDS
T04903
Name
(RefSeq) transcription factor Sox-19b
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbar03000
]
105434020
Transcription factors [BR:
pbar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
105434020
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
105434020
NCBI-ProteinID:
XP_011647876
UniProt:
A0A6I9WYK3
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MRAGGNMCDGPFTETLRASMQGMTGTSPSSATAVGHMGVSLGSPLGSAGKKVQVEHIKRP
MNAFMVWSRLQRRKIAQENPKMHNSEISKRLGAEWKLLTEDEKRPFIDQAKRLRAQHMKE
HPDYKYRPRRKPKTLRKEGYPYSIPYPKSDTTNLSKGSTDRSYFIFKYGLYCIAGMAGGM
GQAGMGSYYNPAAAYGPLSAASMAAAAAAAAQQSAAMSGLTAPAQVVGSMDAMKYSMEAD
KYRAAYMPPSTLAMSMYPDPKYLDSSNPKAYLDRSYLDSAKAYFEQSKIYMEKPTITEYN
RPSYEPNKLYEESSPASVIGGSGPARSPPAESPDTSKQHERTEQGSSSASSTSTSSAASP
GATLPAYYPGSVQAGGLLGPQMGQYGGYQMAPAPGNESFRRPLVIL
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgagagccggcggcaatatgtgcgacgggccctttacagaaaccttacgagcaagtatg
caagggatgacaggcacttcaccatcgagtgctactgccgtcggtcatatgggagtcagt
ctcggtagcccgctaggctcagctgggaagaaggttcaggtggaacacataaaacgaccc
atgaatgctttcatggtttggtcacgtttacaacgacggaagatagcacaagaaaatccc
aaaatgcataacagtgaaatctccaaaaggctaggtgcagaatggaaactcctcacagag
gacgagaaacgcccattcattgatcaggccaagaggttacgtgctcaacacatgaaggag
catccagattacaagtatagaccacgaagaaaaccgaaaacgctgcggaaagaggggtac
ccttacagtattccgtatccgaaatccgacacgacaaacctgtcaaaaggatcgacggat
cgatcgtattttatttttaaatatgggctttactgtattgcagggatggctggtggtatg
ggacaagccggaatgggctcttattataaccctgcagcagcttacggcccgctctcggcg
gctagcatggctgcagcagcggcagcggctgcacaacaatcggccgccatgtctggtctc
acggcacctgctcaggtagtgggctcgatggacgccatgaagtactcaatggaggctgat
aaataccgcgctgcttatatgccgccaagcactctagcgatgagcatgtatccggatcct
aagtacctggactcgtccaatcctaaggcctacttggaccgcagctatttggattctgcg
aaagcgtatttcgagcaatcaaagatctatatggaaaaaccaactattacagaatacaat
cggcccagctacgagcctaacaagctgtacgaagaatccagtccggctagcgtcatcggc
ggaagtggacccgcaaggtcaccacccgcggagtcaccggacacaagcaaacagcatgag
agaacagagcaaggttcatctagtgcaagttcaacatcaacgtcatcggctgcaagtccc
ggggcaactctgccagcatattaccctgggtccgttcaagctggaggcctgttgggtcca
caaatgggtcaatacggcggatatcaaatggcaccagcaccgggaaatgaatctttccgg
aggccgttagtcatcttatga
DBGET
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