Pogonomyrmex barbatus (red harvester ant): 105434045
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Entry
105434045 CDS
T04903
Name
(RefSeq) nucleoporin GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03013
Nucleocytoplasmic transport
pbar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105434045
03015 mRNA surveillance pathway
105434045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbar03019
]
105434045
Messenger RNA biogenesis [BR:
pbar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105434045
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
105434045
NCBI-ProteinID:
XP_011647917
UniProt:
A0A6I9WUJ8
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MSFNWTKRKPETDTMNRENTRGILCSGRIVKVNKNTNNMDITSDFACLKVSALQKASRIS
AITKIDRVTIGPQSAMYEDDSDKMDNIENEKNSCNIKSPQKAVTSPKSNMVSSTNGILFS
IKKILLEKELQRKEEVMKEMKRRIQHMNDNGRVIQEQMANSRSLMARERERRTEEKLAEF
LAEQERIAEQDEIKRRHEQQLQMQRVQEQKEKLEREVEEYRRRMKEKEELLKSVLFHRSQ
FMAKYHDLETLSKSCKDPETFSMVIATHTARIRDLILQIEAIDKKIVNGELVATDVNIIE
TVVCHFDDILNVFRSETEKINTQYEAELVRKAQAANEVQPVEEPNSVPISNIIPPQQSDE
SNVEKKGDQNSDITTNQETAVTLVNTPPVSDPKPEEEVKDSTRKNDSFEYVDKESLQIYV
RSQQFLQFYRETCKEFLQSPSTKKFRFECQKAINIPVNAISGVSEQHLRDKYDRLQNLLI
GKLPPNVIQHPQGVIFCKNHLAKKIVSQGETLVSSKPEMAFPVAMIVVALWNEHPDFGEL
FLAHLHEACPFTVPMFLPQQEGQSNEDYYKSLGCKYSEDGTVEKQDKFLKRMSGLIRLYA
SITVTKQRKGVTKTHPHGLQHAWRWLAAVLNIEPRADICDLCATLILDMLEVAGNVLWTM
YQKQFHKLLILLIEKYYPRMRNVADGGGGPLVRLEEFLKNALIIGTIRPADGMLPPHFL
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttaactggacgaaaaggaaaccagaaaccgatacgatgaatcgagagaatacg
cgaggcatactctgttctggccggattgttaaggtaaacaaaaatacaaataacatggat
atcacatcggattttgcctgccttaaggtctcggccttgcaaaaggcatcacgcatatca
gcgattacaaagattgatcgtgtcacaattggaccccaatcggcaatgtatgaagatgat
tctgataaaatggataatatcgagaacgaaaaaaattcctgtaacattaaaagtccacag
aaagctgttactagtcctaaatctaacatggtatccagtacaaatggtattttgttctcg
atcaagaagattcttctggagaaagagctgcaaagaaaagaagaagtcatgaaagagatg
aagcgtcgtattcagcatatgaacgacaatggtcgtgttattcaagagcaaatggcaaac
tcccgttcattgatggcacgcgaacgcgaacgtcggactgaagaaaagttggccgaattt
ctagccgaacaggaacgaattgcagaacaggacgagatcaagaggcgtcacgagcaacaa
ttgcaaatgcaacgtgttcaagagcagaaagaaaagcttgaacgagaagtggaggaatac
cgaagacggatgaaagaaaaggaagaactgttgaaatctgtattattccatcgaagccag
ttcatggccaaatatcatgatctcgaaacactatctaagtcctgcaaagatccagaaaca
ttcagcatggtcattgcgacacataccgcaaggataagagatttgatactacaaattgaa
gctatcgataaaaagattgttaatggagaattagtagccacagatgtaaacattattgag
actgtggtttgccattttgatgatatattgaatgtatttcgttcggaaacagaaaaaata
aatactcaatatgaagcagaattggttcgtaaagcgcaagctgcaaatgaggtacagcca
gttgaagagccaaatagtgttccaattagtaatataattcctcctcaacaatcagatgag
agcaatgtggaaaagaaaggagatcaaaactccgatataacaacaaatcaagaaacagca
gtcacattggttaatacaccgcctgtatctgatcctaagccagaagaagaagttaaagat
tccacgcgcaaaaatgattccttcgaatatgttgacaaggagtcattacagatttacgtc
aggagccaacaattcttgcagttttatagagaaacttgtaaagagtttttacaatcgcct
agtacaaagaaatttcgcttcgagtgtcaaaaggcaattaacattcctgtaaatgctatt
tccggcgtaagcgagcaacacttaagagataaatatgataggctacagaatcttttgatt
ggaaaattgcctcctaacgttatacaacatccacaaggagtgattttctgcaaaaatcat
ctggcgaaaaagatagttagtcaaggcgagacgttagtatccagcaagccggaaatggca
ttccctgtggcgatgatcgttgtagccctctggaacgaacatccagactttggcgaatta
tttttggcacatcttcacgaggcatgcccgtttaccgtgccaatgtttttaccacagcaa
gaaggacagtccaacgaggattattacaaatccctcggttgtaaatactccgaagatggt
actgttgaaaaacaggataagtttttgaaaaggatgtcaggtttaataaggctatatgca
tcgattactgttactaaacagcggaaaggtgttaccaagactcatcctcatggtcttcag
catgcttggagatggttggcagctgttttgaatattgaaccacgagctgacatttgtgat
ttatgtgcaactttgatattggacatgcttgaggtagctggtaatgtgttatggactatg
tatcaaaagcagttccacaaattattgatattattaatagaaaaatattatccgcgtatg
cgtaatgttgcggacggtggtggtggtcctctggtacggttagaagaatttctaaagaac
gctctgataattggtaccatacgtcctgccgatggaatgcttccgcctcatttcttgtga
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