Pogonomyrmex barbatus (red harvester ant): 105434105
Help
Entry
105434105 CDS
T04903
Name
(RefSeq) LOW QUALITY PROTEIN: DNA excision repair protein ERCC-6-like
KO
K10841
DNA excision repair protein ERCC-6
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
105434105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pbar03036
]
105434105
03400 DNA repair and recombination proteins [BR:
pbar03400
]
105434105
Chromosome and associated proteins [BR:
pbar03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
105434105
DNA repair and recombination proteins [BR:
pbar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
105434105
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Motif
Other DBs
NCBI-GeneID:
105434105
NCBI-ProteinID:
XP_011648007
UniProt:
A0A6I9X5H9
LinkDB
All DBs
Position
Unknown
AA seq
1067 aa
AA seq
DB search
MAETSDNEGDASCFDDSTMDNKLNDDFSNVLQEIISIKTEDSVLQEVSERIKSTAKLNNS
RETQKNDAELDVEINNKDNQRTELQKQVEIGEITPFEAVFKQSVLEQKEGTASKGSQLLD
LEKYFKQQAALAEQKRKLKKVSKTPSDKDHSIPVKKAKLFNIDPKTNKKCQRSKHESNRD
NILQNIDKAGSSNIANESTCNSSESEYVPSDNEAYSDAEDKVLSKXKKTVIKSGYTRTKR
TRDDGDNQLFKQRVETNIYPKDEAMHKVDTLFKVPQSIWEKLYRYQKVAVQWLWELHGRK
LGGLLGDEMGLGKTVQVIAFLAGLDCSELLSHNGRYRGLGPTIIVCPATLMEQWVKHFHX
XXXYVYMCICHKXYSCSFSGDPESLIESLQTGGILVTSYNGVLRHKDLLVSSQWHYVILD
EGHKIRNPQAKVSRAVKWFSTPHRLLLTGSPMQNSLKELWSLFDFILPGKLGTLPVFLEH
CAAPITRGGYANATPLQEATALHVATMLKNTITPYMLRRTKIDVKHHLSLPEKNEQVLFC
SLTDEQKKLYKKYLCSDDVSFILHERNDSGRYRARFLIALSALRKICNHPDLFLYTRELD
SDEDVDLSEEKLEKFGYWKRAGKMTVVRSLLKIWQKQGHRVLLFTQGRQMMHILEALLQR
EGYTYLKMDGTTAMSQRQETIHTFNKDMSYFVFLLTTRVGGLGVNLTGANRVIIYDPDWN
PATDAQARERAWRIGQDKQVTIYRLITAGTIEEKIYHRQIFKLLLSNKVLDDPRQRHLFK
TSDLVELFNLNEPIDGESSESDRLFKESKLTPSGFSLSKIEEMRKLASTLSKKISATVKS
VQENKNADNSTCEEKRDEQDSSKCIEVLNTENDKFVDQTLISDQMLISDTPKSLDKCDKD
VDKNSNIERNSNIQNKDTYKQNHCEQEKTTSMKSLNNNSVEKKNKFDRNDTKLSSTHRHK
KCKKDSHLDRRNISAMFEGERISCLIGRRLGRSNETEDSVSTADDDYVLRKLFAKSTVSS
AFQHEAVLSNAHHNSDSENAMQRFARESAQESMDFVHQSGKHCWRPA
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atggcagagacaagtgataacgaaggtgatgcatcctgttttgatgacagcacgatggac
aataaattaaatgacgatttttcaaatgttttacaggagataatatctattaaaacagaa
gatagcgttttacaagaggtatcagaacgtatcaagtccactgcaaaactaaacaattcg
cgtgaaacacaaaaaaatgatgctgaactggatgttgaaattaataacaaagataatcaa
agaacagagttgcaaaagcaggttgaaattggagaaattactccctttgaagcagtattt
aagcagtcagttttggagcaaaaagaaggaactgctagtaaaggttcccaattgttagat
ctcgaaaagtactttaaacaacaagctgctcttgctgaacaaaaaagaaaattaaagaaa
gtatccaagacaccttctgataaagatcattcaataccggttaaaaaagcaaagctattt
aatattgatccaaaaacgaataaaaaatgtcaaagatccaaacatgagagcaatagagat
aacattctacaaaatatagacaaggcaggttcctccaacatagcaaatgaatctacttgc
aacagttctgaaagcgaatatgttcccagcgataatgaagcgtattctgatgcagaagat
aaggtattatctaaanaaaagaaaactgtgattaaatcaggatacactcgtacaaaaaga
actcgagatgacggggataatcaattatttaaacaaagagtagaaacaaacatctatcct
aaagatgaagcaatgcacaaagttgatactctctttaaagtgccacaaagtatttgggaa
aaattatacaggtatcagaaggtcgcggttcagtggctctgggaattgcatggacgtaaa
ctaggcggcctgttgggtgacgaaatgggattagggaaaactgtacaggttattgcgttc
ctcgcgggtttagattgcagcgaattactttctcataatggaagatacagaggattaggc
ccgactattattgtatgtcctgctactttaatggagcaatgggtaaaacattttcatgnn
nnnnnnntatatgtgtatatgtgtatatgccacaaatgatattcatgctctttttcaggt
gatccagaaagtttgatagaatcactacaaactggtggaatacttgttacttcttacaat
ggagtcctcagacacaaagatttacttgtatctagtcaatggcattatgttattcttgat
gaaggccacaagattcgtaatccgcaagcaaaggtgagccgagcagtgaagtggttctcg
acaccacatcgattgctactgaccggtagtccaatgcagaattctttgaaggaactgtgg
tccttgtttgatttcatcttacctggcaaattaggaactctgcctgtatttttggaacat
tgtgcagctcccataacgcgcggcggttacgcaaacgccactccattgcaggaagctacg
gcccttcacgtggccactatgctaaagaacactatcacaccatacatgctccgaagaacg
aagatcgatgtgaagcatcatctctctttaccggagaaaaatgaacaggtgttattctgt
agcttaacggatgagcaaaagaagctgtataaaaaatatctatgttctgatgatgtgtcc
tttattcttcatgagaggaacgacagcggaagatacagagcaaggtttcttatcgcgttg
tcagcattgagaaagatatgcaatcatccggatctgtttttgtataccagagaactagac
tccgatgaagatgtcgatttatccgaagaaaagttagagaaatttggctattggaaacgt
gctggaaaaatgacagtggttcgatctctcttaaaaatttggcagaaacaagggcataga
gtgttactttttactcagggaagacagatgatgcatattttagaagctctcttgcaacgc
gaagggtacacttatttaaaaatggacgggacaacagcaatgtctcaacggcaggaaacg
attcacacatttaacaaggacatgtcatactttgtatttttattaacaacgcgcgtggga
ggtttgggagtaaatctaactggtgcaaatcgagtgatcatttacgatcctgactggaat
ccagccacagatgctcaagcaagggaacgtgcgtggagaatcggacaggataagcaagtc
accatatatagattaattaccgctggtacgatcgaagaaaagatatatcacagacagatc
ttcaaattactactttcaaacaaagttcttgatgatccacgtcaacgtcatctattcaaa
acatcggatctggttgaactgtttaatctgaacgaaccgatagacggtgaatcttctgaa
tcagatcgcttatttaaagaatctaaattgacacctagcggtttttctcttagcaagatc
gaagaaatgagaaagttagcgtcgactctgagtaagaaaataagcgcaactgtaaaatca
gtgcaggaaaataaaaatgcagacaacagcacttgcgaggaaaaacgtgacgaacaagac
agttcgaaatgcatcgaagttctcaatacagaaaatgataaatttgtggatcaaacatta
atttccgatcaaatgttaatttctgatacaccaaaatctttagacaaatgtgataaagat
gtcgataagaattccaatatcgaaagaaacagcaacatacaaaataaagacacatataaa
cagaatcattgtgaacaggagaaaacaacttcaatgaaatctttaaataacaattctgtg
gaaaagaaaaataaatttgatcggaatgacactaagttatcatctactcatagacacaaa
aagtgcaaaaaagattcacatttggacaggagaaacatttccgcaatgtttgagggagaa
cgtatatcttgtctgatcggtcgtcgtctgggacgttccaatgaaacagaagattcagtt
tcaactgcagatgatgactatgtgctgaggaaactatttgctaaatcaactgtcagttcg
gcctttcaacatgaagcagtattatcaaatgcacatcataatagtgacagtgagaatgcg
atgcaacgttttgcgcgtgaatcggcgcaggaaagtatggattttgttcatcaatcaggg
aaacattgctggagaccagcgtag
DBGET
integrated database retrieval system
