Pogonomyrmex barbatus (red harvester ant): 105434110
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Entry
105434110 CDS
T04903
Name
(RefSeq) LOW QUALITY PROTEIN: high mobility group protein DSP1-like
KO
K10802
high mobility group protein B1
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03410
Base excision repair
pbar04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105434110
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105434110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pbar03036
]
105434110
03400 DNA repair and recombination proteins [BR:
pbar03400
]
105434110
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pbar04147
]
105434110
Chromosome and associated proteins [BR:
pbar03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
105434110
DNA repair and recombination proteins [BR:
pbar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
105434110
MMR (mismatch excision repair)
Other MMR factors
105434110
Exosome [BR:
pbar04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
105434110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
FTCD_C
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
105434110
NCBI-ProteinID:
XP_011648020
UniProt:
A0A6I9WWZ9
LinkDB
All DBs
Position
Unknown
AA seq
268 aa
AA seq
DB search
MDAAAQNNLHQQLQGQQQQQQPQQQHLSPITTQTSTPPVMSPHPIQQIPQNNLQQNNAQS
LQRDNMPRGKDSKPRGRMTAYAFFVQTCRQEHKKXHPEEKIVFREFSKKCAMRWKTMSDI
EKKRFHEMAEKDKKRYDAEMQNYTPPKGENKGRGKKRKHIKDHNAPKRSLSAFFWFCNDE
RGKVKMLNPEYGVGDIAKELGKKWSDADPETKSKYEAMAEKDKARYEREMTAYKKKMQND
GAPMVGGAPANQTMIKSDSEEEWKEDDE
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgccgcgcagaacaacctgcatcagcagttgcagggccaacagcaacaacag
cagccacaacagcaacatctctcgcccattaccacgcaaacgtccacgccccccgttatg
tctccgcacccgatacagcagataccgcaaaataatcttcaacaaaataacgctcagagt
ctgcagcgggacaatatgccgagaggaaaagattcgaagccaagaggacggatgacagcg
tatgcgttcttcgtccagacatgtcgtcaggagcacaaaaagnaacatcccgaggagaag
atcgtcttccgggagttctccaaaaaatgtgcaatgaggtggaagactatgtcggacatc
gagaagaaacgtttccacgaaatggcagagaaagataagaagagatacgacgcagagatg
cagaattacacgccgcctaagggagaaaataagggcagaggcaagaaacgcaaacatatt
aaggatcacaatgctcccaagagatcgctgtctgctttcttctggttctgcaatgacgaa
cgcggtaaggtcaaaatgctgaatcctgaatatggcgtaggcgatatagctaaggaatta
ggcaagaaatggtcggacgcagatcccgaaaccaaatccaaatacgaggctatggcagag
aaggacaaagctcgatacgaaagggaaatgaccgcgtacaaaaagaaaatgcaaaacgac
ggcgccccgatggtgggaggagcgccggcgaaccaaactatgataaaaagcgacagtgaa
gaggaatggaaggaagacgacgaatag
DBGET
integrated database retrieval system
