Pogonomyrmex barbatus (red harvester ant): 105434333
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Entry
105434333 CDS
T04903
Name
(RefSeq) non-canonical poly(A) RNA polymerase PAPD5-like
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105434333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbar03019
]
105434333
03016 Transfer RNA biogenesis [BR:
pbar03016
]
105434333
Enzymes [BR:
pbar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
105434333
Messenger RNA biogenesis [BR:
pbar03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
105434333
Transfer RNA biogenesis [BR:
pbar03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
105434333
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
TUTase
PAP_NTPase
Motif
Other DBs
NCBI-GeneID:
105434333
NCBI-ProteinID:
XP_011648330
UniProt:
A0A6I9WZK6
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MDPTIGWYQPEQYGPAKDLWLNIWEAEKGLDVLTLRNDANTSNAMGVRLQQDFLALDTSP
AAAAAAATAAAATATAAGTTPLSNTTATTVGSNAGTGGFIVGGNNGNGNGSGGNNSNGSN
GRAASTVHGNAAGNSNGEHRVPHNACNYYYNPSRRKGENRASTYGMNYNYDALVGEYGGC
PWRVPNKHYSKGVVGLHEEIEDFFAYMCPSHEEHVLRLRVVKRIENVIYDLWPDSKVEVF
GSFRTGLYLPTSDIDLVVIGMWTNLPLRTLERALLDQNIAEPSSIKVLDKASVPIVKLTD
KESEIKVDISFNMNNGVKSAELINSFKRQYPVLEKLVMVLKQFLLQRDLNEVFTGGISSY
SLILMTISFLQLHARQNVHCPNANLGVLLIEFLELYGRKFNYVKTGIRVKDGGTYISKEE
VQRDMIDGHRPSLLCIEDPLTPGNDIGRSSYGALYVKDAFDWAYFILSQAVSPLNILVND
ASKVSILGRIIRVTDEVIEYRRWIKETFLLPVSEGDSLSSSTGSDASTLSAPASDTDSEC
SRGNSPNTGGKSESDKNKDRHFYNSHQIHHYSGKKAFKAATHANHQQSFKGSYHRINNNI
VGQNKTKHALHNNGNNNNNNNNNTSHSPSSRPNSMKRKKQCTMQRGTGDCVR
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggatccgaccatcggttggtaccaaccggagcagtacggccccgccaaggacctttgg
ttaaacatctgggaggctgagaagggtctcgacgttctgactctgcgtaacgacgcgaac
acgagcaacgcgatgggcgtgcggctgcagcaggactttctcgcgctggacacgagcccg
gcggcagcggcagcagcggcgacggcggcggcggcaacggcaaccgcggctggcaccacg
ccgttgtccaacaccaccgccaccaccgtcggcagcaacgccggcaccggtggtttcatc
gttggtggtaataacggcaacgggaacggcagcggcggcaacaatagcaacggtagcaac
ggccgtgccgcatccaccgtccacggcaatgccgccggtaacagcaacggcgaacaccgc
gtgccccacaacgcctgcaactattattacaacccgtcgcgcaggaaaggcgagaatcgt
gcgagcacctacggcatgaattataattacgacgccctcgtaggcgaatacggtggttgt
ccttggcgtgtgccgaacaaacactactccaagggggtagtcggattacatgaagaaata
gaagatttttttgcatacatgtgtccctcacatgaagagcatgttttacgattgagagtt
gtaaagagaatagagaatgtaatttatgatctctggccagactctaaagtcgaagtgttt
ggcagttttcgcactggtttatatttgcctacaagtgatatagatttggtagtaataggg
atgtggacaaatcttccattgcgtactttggaacgtgctttactagatcaaaatattgct
gagccatcttctattaaagtgttggacaaggctagtgtgccgatcgtcaaattaaccgat
aaagaaagtgaaattaaggtggacatcagtttcaatatgaataatggcgtcaagtccgct
gagttgataaactccttcaagaggcaatatccagttctagagaaattagtcatggtatta
aaacagtttctactacagagagatcttaatgaagtgttcactggcggtatatcctcatac
agtttaattctcatgaccatcagttttttacaattacatgcaaggcagaacgttcattgt
ccaaacgctaatctgggagtgttgttgatcgaatttctagagctttatggtagaaagttt
aattatgttaagactggcattcgtgtgaaggatggtggtacttacatatctaaagaagag
gttcaacgagatatgatagatggtcatcgaccatctctgttatgcatagaagatccactc
acaccaggaaatgatatcggccgcagtagttacggtgctttgtatgtaaaggatgcattt
gattgggcctattttattctttctcaagcggtcagccccttaaatatcttagtcaatgac
gccagcaaagtaagcatattgggaagaataattcgcgtgaccgacgaagtaatagaatat
cgtaggtggatcaaagaaacattcctcttacctgtaagcgaaggagactctttgtcaagc
tcaactggttctgatgcatccactctttcagctcccgccagtgataccgattccgagtgc
agtcgtggcaattctccaaacactggtggaaagagcgaaagtgacaaaaacaaagatagg
cacttttataatagtcatcaaattcatcattattctggaaaaaaagcattcaaagcagcc
actcatgccaatcaccaacagagtttcaaaggcagttatcatcgcatcaacaacaatata
gttggtcaaaacaagaccaagcacgcactccacaataatggaaacaacaataataataat
aataataatactagtcacagtccaagctctaggccaaactcaatgaagaggaagaagcaa
tgtacgatgcaacgcgggactggagattgtgtacggtga
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