Limihaloglobus sulfuriphilus: SMSP2_00297
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Entry
SMSP2_00297 CDS
T04749
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pbas
Limihaloglobus sulfuriphilus
Pathway
pbas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SMSP2_00297 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbas03021
]
SMSP2_00297 (rho)
03019 Messenger RNA biogenesis [BR:
pbas03019
]
SMSP2_00297 (rho)
Transcription machinery [BR:
pbas03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
SMSP2_00297 (rho)
Messenger RNA biogenesis [BR:
pbas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SMSP2_00297 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
NACHT
HC2
AAA_25
Spore_III_AA
ATPase_2
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AQQ69963
UniProt:
A0A1Q2MB59
LinkDB
All DBs
Position
complement(396571..398358)
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AA seq
595 aa
AA seq
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MSETEKNEVETAESSDTKAAVKKTTRKKTTAKKTTAKKTTAKKKTTKKKTSAKKAAAKKT
ADQADLFEGIEADSENTQPKKPEPAAKDETSSESPADKKPQIEPEKDVNNDSKEAEAGTR
VESEAGKEEKSEPQQQKQYQQKPTQNRQQNNGKKKKKKKKGKDDPLHDKYEKVKRDDLHI
TELQKLTVPQLQHMAREFGVTDYQGMSSQQLIFHILKSRIQESGLLYGEGVLEVLPDGFG
FLRNPQDNYLASPNDIYVSPSQIRRFGLRSGNIVQGQIRPPKENEKYFALLKVEAINFQE
PDKLADKILFRDLTPLHPEERFVLETTSQEMSTRIIDLVTPVGKGQRGLLVAPPRTGKTV
LLQKLTNAISTNHPDVYMIVLLIDERPEEVTDFKRKVRNGVEVISSTFDEPTSRHCQVAE
MVIEKAKRMVEYGQDVVILLDSITRLARAYNTEMPHSGKILTGGVDANAMQMPKRFFGAA
RNIEEGGSLSIFATALVDTGSKMDEVIFEEFKATGNMELHLDRRLVERRTYPAIDISKSG
TRREELLLDNRELELTYRLRKVLSEMNIVESIELLKNRLSKTNSNAEFLLSMHVS
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagactgaaaagaatgaagtcgaaacggcagaatcttcggatacaaaagccgca
gtaaagaaaaccacacggaaaaaaactactgctaagaagacaactgcgaaaaaaactact
gccaagaaaaaaaccacaaaaaagaagacttccgccaagaaggcagctgcaaaaaaaact
gcagaccaagccgatctttttgaaggcatagaagctgattcagaaaatacccaacctaaa
aaacccgaaccggctgccaaagatgaaacgtcatctgagagtccggctgataaaaaacca
caaattgagcctgaaaaagacgttaataatgattctaaagaagcggaagccggcacccgg
gtagaatctgaagccggaaaagaggaaaaatcagaaccacagcagcaaaagcagtatcag
cagaaaccaacccaaaaccggcagcagaataacggtaaaaagaagaaaaagaagaaaaag
ggaaaagacgacccgcttcacgataaatatgagaaggtcaaacgggacgatttgcacata
accgagcttcagaaacttaccgttcctcaacttcagcacatggctcgagagtttggcgtc
actgattatcagggcatgtcaagccagcagcttatattccacatactcaaaagcaggata
caggaaagcggccttttatatggcgaaggcgtcctggaagtactgccggacggctttggt
ttccttagaaaccctcaggacaactatctggccagccctaacgacatatatgtttccccg
tctcagattcgccgtttcgggcttcgcagcggcaacattgtccagggacagattcgcccg
ccaaaggagaatgagaaatactttgccctgctaaaggttgaggcgataaacttccaggaa
cctgacaaactcgccgacaagattcttttcagggacttaactccccttcatccggaggaa
cggtttgtacttgaaacgacaagccaggagatgagcaccagaataattgatctggtaacg
cccgtcggcaaaggccagagaggactgctcgtggctccgccgcgtacaggaaaaactgtt
ctgctgcaaaagctcacaaatgcaataagcacaaatcatccggatgtctatatgattgtt
cttcttatagacgagcggcctgaagaggttactgacttcaaacgcaaagttcgcaacggc
gttgaggttatcagctctacattcgatgagccgacttcacgtcactgccaggttgccgag
atggtaatagaaaaggcaaaacgtatggtcgaatacggccaggatgtcgtaatactgctt
gactctattacccgtcttgccagggcatacaacacagaaatgcctcacagcggcaagata
cttaccggcggtgttgacgcaaacgctatgcagatgcccaagcgattcttcggtgccgca
cgtaatatcgaggaaggcggctcgctgtctatcttcgctacggcgcttgtcgataccggt
tccaagatggacgaggttatctttgaggaatttaaagccacaggcaacatggagctgcac
ctcgacagacgccttgttgagcggcgtacatatccggcaatcgacatcagtaagtcgggt
acccgccgtgaagaactgctccttgacaacagggagcttgaactgacgtaccgccttcgc
aaggtactgagtgaaatgaacatcgtagaatctattgaactgctcaaaaaccgtcttagc
aagaccaatagcaacgcggaattccttctctcaatgcacgtaagctga
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