Limihaloglobus sulfuriphilus: SMSP2_00546
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Entry
SMSP2_00546 CDS
T04749
Symbol
sigA
Name
(GenBank) Sigma-A
KO
K03086
RNA polymerase primary sigma factor
Organism
pbas
Limihaloglobus sulfuriphilus
Pathway
pbas02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pbas00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SMSP2_00546 (sigA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbas03021
]
SMSP2_00546 (sigA)
Transcription machinery [BR:
pbas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SMSP2_00546 (sigA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
HC2
Sigma70_ner
STPRs
Motif
Other DBs
NCBI-ProteinID:
AQQ70203
UniProt:
A0A1Q2MBV9
LinkDB
All DBs
Position
697549..699666
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AA seq
705 aa
AA seq
DB search
MAKKSETSKKTTPKKTASKKEEVKKTAAKKTAPKKAADKKSATKTSAAKKPAAKTARKKS
SKKLTAEDIAKMTPEEIAALSPEQLSSIADDMISDDKKKPAKDSEDSNEQEPDEFDEDYE
DFDEEDLLLLDDEEEESEEEEEEPELTPKELELIIEQKLKELIAKGKKKGFLTYEELNDE
LPDEVVSPDRLDSLLMSLDEMGIQLVDESDMTGKDVFELKDDDEDFDAVEEEEVDEDQLY
QQSLMEADAKRIDDPVRMYLTQMGEIPLLAREDEISLARKIELTRMAFRRKILENDYCAG
EAIKILQLVSDGELPFDRTMKMSTAENLIRSVVKMRLPQNLKTARLLLEQNLMLFEKWST
LEDGSQKNKALVQLRRNRRKVATLLEELSLRTSRVQPLMGKLASMLRKIRNLERLIARGP
QGEIYEDDIEAMQMEHDGLIDMIKESPEQLEKRLKQLGIVFREYEDAKQKLSGGNLRLVV
SIAKKYRNRGLSFLDIIQEGNTGLMRAVDKYEYRRGYKFSTYATWWIRQAITRAIADHSR
TIRIPVHMIETMNKLRTASKNLHQKLGREASIEEIAEEADMNLDEAKRVLKISKHPISLD
RPIGDSEDSYFGDFIEDDRIASPVHSATREMLKDRIDNVLKSLTYREREIIKLRYGIGDG
HTYTLEEVGKIFNVTRERVRQVEAKAIRKLQHPVRSRKLEGFMDL
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaagtctgaaaccagtaaaaagacaacaccaaaaaagacagcttcaaagaaa
gaggaagtaaagaaaacagctgcaaaaaaaaccgctcccaaaaaagcggcggataagaag
tctgcaacaaagacttcagcggcaaagaaacccgctgctaaaacagcccggaagaagtcg
tctaaaaaattaaccgccgaggatatcgcaaagatgacgccggaggaaatagcagcactc
tcgcccgaacagcttagttcgatagcggatgatatgatttccgatgacaagaaaaaaccc
gctaaggattcagaggactccaatgagcaggagccggatgaattcgatgaagactatgaa
gatttcgacgaagaagatcttctgctgctcgatgatgaggaagaggaaagtgaagaagag
gaagaagaacccgagctcacacctaaggagcttgagctgataatagaacagaagctcaaa
gagcttatagcaaaaggcaagaaaaaaggctttttgacatacgaggagctcaatgatgag
ctgcccgatgaggttgtctctccggacaggcttgacagtcttttgatgagtctcgatgag
atgggcattcagctcgttgacgagtcagatatgactggaaaagacgtttttgagctaaaa
gacgacgatgaagatttcgatgcggtagaagaggaagaggtcgatgaagaccagctttat
cagcagtcgctgatggaggcagacgccaagagaatcgatgatccggtaaggatgtatctg
acgcagatgggagaaattccgctgctggcaagagaggatgaaataagtcttgcccgtaag
atagagctgacgaggatggcttttcgccgcaagattcttgaaaacgattattgtgccggt
gaagcgataaagatacttcagcttgtaagcgacggcgagctgccgtttgacaggactatg
aagatgagcactgctgagaaccttatccgctctgttgtaaagatgcgtctcccgcagaat
ctcaaaactgcacggctgttgcttgagcagaaccttatgcttttcgagaaatggagtacg
ctcgaagacggttcacaaaagaacaaagcacttgttcagcttcgccgcaacaggcgtaaa
gtggcaacactgcttgaggagctcagcctgcgaacaagccgcgtgcagccgctgatgggc
aagctggcaagtatgctgcgaaaaatacgcaaccttgaaaggctgattgcccgcggtccg
cagggcgagatatacgaagatgacattgaagccatgcagatggagcatgacgggctgatc
gacatgatcaaagagagccccgaacagctcgaaaagcgtcttaaacagcttggaattgta
ttcagagagtatgaagacgccaagcagaagctctccggcggcaatctgcgtctggtagtc
tcgatcgcgaaaaaataccgcaaccgcggcctgagctttttggatattatccaggagggc
aacaccggccttatgagagcggtggataaatatgaataccgccgcggctacaaattcagc
acatatgccacatggtggatccgccaggcaataacgcgtgccatagccgaccattcgcgt
actatccgtattcccgttcacatgatagagacaatgaacaagctgcgaaccgccagcaag
aacctgcatcagaaactcggccgcgaggcaagcattgaagagatcgccgaagaagcggat
atgaatcttgacgaagcaaaacgcgttctcaaaatatccaagcacccaatcagtcttgac
aggccgatcggcgacagcgaagacagctatttcggcgactttatcgaagatgaccgcatc
gcctctcccgtccattctgcgacacgtgagatgctcaaagacagaattgataatgtgctt
aagagcctgacataccgtgaacgcgagattatcaagctgcggtacggcatcggcgacggc
cacacatacacgctcgaggaagtcggcaaaatcttcaacgtaacccgtgagcgcgttcgc
caggtggaggccaaggcaatccgcaaacttcagcaccctgtccgctcgagaaaacttgag
gggttcatggatttatag
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