Limihaloglobus sulfuriphilus: SMSP2_01199
Help
Entry
SMSP2_01199 CDS
T04749
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pbas
Limihaloglobus sulfuriphilus
Pathway
pbas03410
Base excision repair
pbas03430
Mismatch repair
pbas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SMSP2_01199 (recJ)
03430 Mismatch repair
SMSP2_01199 (recJ)
03440 Homologous recombination
SMSP2_01199 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbas03400
]
SMSP2_01199 (recJ)
DNA repair and recombination proteins [BR:
pbas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SMSP2_01199 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SMSP2_01199 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SMSP2_01199 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AQQ70837
UniProt:
A0A1Q2MEW9
LinkDB
All DBs
Position
1524403..1526160
Genome browser
AA seq
585 aa
AA seq
DB search
MPTHKKQIKKQLSKIWKIHPVRTEQAKQLSRETGISRIVAQVLLNRNITTSEEAKKFMNP
KLTDLLEPNLLPGISEAVERIQRAIKAGEKITIYGDYDADGITSTAILWRLLTMLNTKVN
FYIPHRIEEGYGLNTASIEKLAEQGTNLIITVDCGITACGEISRASELGMDVIVTDHHKI
ENEIPQASAIVHPQLDMNYPSPASAGAMVAFKLAWAVCNEYKDNNDLYPKLKSFLINATK
FAAVGTIADVMDLVGENRSLAHFGLKAMSSSDMPGVKALINTARLDGKLLSSRDIAFQIA
PMLNASGRLGHARLAVELLTSSSELNSLKIAQYLKQQNNERRKIEREIFKQASQLITTGG
YDHPDRKTIVVAGENWHQGVVGIVASRVAETYFRPAIVFNNDGQTCVGSARSVRNFDIYQ
GISSCAKHLISFGGHAGAAGLRVESKKLPDFIEAFEQHARENILEDEAVSMIDIEGTFEI
GDFNERTIQQIQQLSPFGQGNPVPVFAAMGVRLYNTPRIVGEKGTHLQLSIRDRSGFVRC
IAFGMGNLEKKLIEADYFNVAFTAELNSFNGNSNLQFNICDIQFE
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
ttgcccactcacaaaaaacaaataaaaaaacagctctcaaaaatctggaaaattcaccct
gtcagaactgaacaggcgaaacagctttccagagaaaccggcataagccgaattgtcgca
caggttctgctcaaccgcaacataaccaccagcgaagaagccaaaaagtttatgaaccct
aagctgacagatttgctggagcctaacctgctgccgggaatttctgaggcggttgaaaga
attcagcgagcaataaaggccggcgagaaaatcaccatatacggcgattatgacgcggac
gggataacctcgaccgctatactgtggcgccttttgaccatgctcaacactaaggtcaat
ttttatattccccaccgtattgaagagggatacggcctgaatacggcttctatcgaaaaa
ctcgctgaacagggcactaaccttattataaccgttgactgcggaataacagcctgcggg
gagatcagcagggcttcagagctcgggatggacgtcatcgtaacagaccaccataagatc
gaaaatgaaattccgcaggcttcggcgattgtgcacccccagcttgacatgaattaccct
tcaccggcctcagccggcgctatggttgctttcaaactggcctgggctgtatgcaacgag
tataaagataacaatgatttatatccaaaacttaaatcctttctgataaacgcgacaaaa
ttcgcagctgtcggaacaattgcagatgtcatggatctcgtcggagaaaaccgctcactt
gcccattttgggctaaaagcgatgagctcatcagatatgccgggagtaaaagctcttata
aatactgcccgacttgacggtaaactcctaagcagcagagacatcgcatttcagattgca
cccatgctcaatgcctcgggcagactgggccacgcccgccttgcggttgaacttctgaca
agcagcagcgaacttaattccttaaaaattgcccaatatctcaaacagcaaaataacgaa
cgccgtaaaattgaacgcgagatttttaaacaggcatctcagctgataaccaccggcgga
tacgaccacccggaccgtaaaacaatcgtagttgccggcgaaaactggcaccagggagta
gtcggtatcgttgcaagccgcgtggccgaaacatattttcgtccggctatagtctttaat
aatgacggccagacatgtgtcggttctgcccgctcggtaagaaacttcgatatttaccag
ggtataagcagctgcgccaaacatcttatcagctttggcggacatgccggggctgccgga
cttagggttgaatcaaaaaaactgcctgacttcatcgaggcctttgaacaacacgcccgc
gagaacatactcgaagatgaggcggtttcaatgatcgatattgagggcacctttgagata
ggtgatttcaacgaacgtaccatacagcagatacaacagctcagcccgtttggccagggc
aatccggtgcctgttttcgcggcgatgggtgtgcgtctgtataatacgccgcggattgtc
ggagaaaaaggcacgcatcttcagctgagcatacgtgaccgcagcggatttgtacggtgc
attgctttcggtatgggtaacctggaaaaaaaactcatagaagctgattatttcaacgtt
gcttttaccgccgagcttaacagcttcaacgggaattctaacttgcaattcaacatatgt
gatatacaattcgagtaa
DBGET
integrated database retrieval system
