Limihaloglobus sulfuriphilus: SMSP2_02213
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Entry
SMSP2_02213 CDS
T04749
Symbol
recQ_1
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pbas
Limihaloglobus sulfuriphilus
Pathway
pbas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SMSP2_02213 (recQ_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbas03019
]
SMSP2_02213 (recQ_1)
03400 DNA repair and recombination proteins [BR:
pbas03400
]
SMSP2_02213 (recQ_1)
Enzymes [BR:
pbas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SMSP2_02213 (recQ_1)
Messenger RNA biogenesis [BR:
pbas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SMSP2_02213 (recQ_1)
DNA repair and recombination proteins [BR:
pbas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SMSP2_02213 (recQ_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AQQ71834
UniProt:
A0A1Q2MGQ7
LinkDB
All DBs
Position
complement(2831906..2833738)
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AA seq
610 aa
AA seq
DB search
MTDNVRQLGKIKSALSKYWGYNSFRPLQEEAMHCAVTGRDSVVVLPTGGGKSLCFQVPAV
IGEGLTVVVSPLISLMKDQVDALVDCGVAAARLDSSLMTHEQDRVFEMIASNRLKLLYIS
PERIVSEWFLNILCGCKISFIAVDEAHCVSMWGHDFRPEYRQLGRLKQRFPGVCIGAYTA
TATAVVRQDIAAQLNLTDPAMLTGSFDRPNLIYRVKPRGNILKQVRSVVDRHKNESGIIY
CIRRKDVDSLCDSLQSAGYRAAGYHAGMKDHQRKLSQDLFITEKVDIVVATIAFGMGIDK
SNVRYVIHTGMPKSLENYQQESGRAGRDGLEAECWLFYSGGDYGVWKSIISNSENSTPQS
TEAAMEKLTGIYSYCTGDTCRHRNLVEYFGQTLKAGSCSACDICLDEYDAIEDALIIGQK
ILSCIMRVEQRFGGGYVASVLAGSKDKRIIENGHDRLSTYSLLAEYQIKTIRGWIEQLTG
QGYIEKCGEFNVLAVTKKGWNVLRGEETPRLLKPTMQKEKIQKARIASSSWQDVDRSLFE
HLRKLRAEIAATRRIPAYIIFGDTSLRDMARIMPASDEEFLQVNGAGRKKLKKYGKMFMR
AIEEYQQNHT
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataatgtcagacagctgggaaagattaaatcagcgttatcaaagtattggggc
tacaacagcttccggcctctgcaggaggaggccatgcactgcgctgtaacaggcagggat
tcagttgtcgtactgcccaccggcggcggcaagtcgctatgtttccaggtgccggcggtt
ataggtgagggcttaacggttgtagtctcgccgctgatttcattgatgaaagatcaggtt
gatgcgctggttgactgcggcgttgcggcggcgcggcttgacagttcgctgatgacgcat
gaacaggacagggtgttcgagatgatcgcctctaaccggctcaaactcctttatatttca
cctgaaagaatcgtctcggagtggtttctaaatattctgtgcggctgtaaaatatccttt
atagccgttgatgaagcccattgtgtgagcatgtgggggcatgatttccgtcccgaatac
cgccagctcggccggctcaaacagcggtttccaggcgtatgtatcggcgcatataccgca
actgccaccgctgtggtgcggcaggatatcgccgcacagctcaatctcacagatccggca
atgctgacaggctcattcgaccggccaaatctcatatacagggtgaagcctcgcggcaat
atacttaaacaggttcgctctgtagttgaccgccacaaaaacgagtccggcataatctac
tgtataaggcgaaaagacgtagattcgctctgtgattccctccagtccgccgggtacagg
gccgcgggctaccatgccggcatgaaggaccatcaacgcaagctcagccaggatcttttt
ataacagaaaaagtagatatagttgtcgctacaatcgccttcggaatgggtatcgataaa
tccaacgttcgatacgttattcataccggtatgcctaaatctctggagaattaccagcag
gaaagcggaagggcgggccgagacgggctcgaggcggaatgctggctgttttattcaggc
ggcgattacggcgtatggaagagcattatcagcaattcagagaattccacaccccagtca
acagaagcggctatggaaaaactcacaggcatatacagctactgcacgggtgacacatgc
cgacaccggaatctggttgaatactttggccagacgctcaaagccggcagctgcagcgca
tgcgatatctgccttgatgagtatgacgcgatagaagatgcactcataatcggacagaag
attctatcctgtatcatgcgggtcgaacagcggtttggtggcggctatgttgcctctgtt
ttggccggttccaaagataaacggataatagaaaacggccatgacaggctcagcacctat
tcgctgctcgcggagtatcagattaaaacgatacgcggctggatagaacagctcaccggc
cagggctatatcgaaaagtgcggcgagttcaatgtgcttgctgttaccaaaaaaggctgg
aatgttcttcggggcgaagagacgccgcggctgctcaagccgacgatgcaaaaagaaaag
atacaaaaagcccggatagcatcaagttcctggcaggatgttgaccgaagtctctttgaa
cacctacgcaagctccgcgccgagatcgccgcgacaaggcgcattcccgcttacattatt
tttggcgacacctcgcttagagatatggcacgcataatgcccgcctcagatgaagaattc
ttacaggtcaacggcgcaggccgcaaaaaactaaaaaaatacggcaaaatgtttatgcgg
gcaatagaagaataccagcagaatcatacatga
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