KEGG   Limihaloglobus sulfuriphilus: SMSP2_02253
Entry
SMSP2_02253       CDS       T04749                                 
Symbol
rne
Name
(GenBank) Ribonuclease E
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
pbas  Limihaloglobus sulfuriphilus
Pathway
pbas03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pbas00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SMSP2_02253 (rne)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pbas03019]
    SMSP2_02253 (rne)
   03009 Ribosome biogenesis [BR:pbas03009]
    SMSP2_02253 (rne)
Enzymes [BR:pbas01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     SMSP2_02253 (rne)
Messenger RNA biogenesis [BR:pbas03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SMSP2_02253 (rne)
Ribosome biogenesis [BR:pbas03009]
 Prokaryotic type
  rRNA processing factors
   SMSP2_02253 (rne)
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1
Other DBs
NCBI-ProteinID: AQQ71874
UniProt: A0A1Q2MGU4
LinkDB
Position
2888289..2889815
AA seq 508 aa
MSRDVLVNVSQPEECRVAVVEDGILDELYIERTNLQSCVNNVYKGKITGIEPSIQAAFVE
FGGPKAGFLHISDVHPKYFTKDYPVEKVGQRLSMRKRPPIQKCLKRGQEIMIQVTRDGIE
KKGPTVTTYISMPGRYLVLMPWLHGVGISQKVEENEDRKRLREIFDDEDQYRNCGLIVRT
AAKDASKRALQSDLRYVMRLWGSIQKKFKRSKAPTEIYQDSNLAIRTLRDIFNTKLTKIV
CDSEEMGRKLMEFVAISQPRMKKIVSIYNDKVPLFHHYNIEDQIKTIHSNRVELPSGASI
VIDQTEALVAIDVNTGKGSRHNDAETNIYKTNLEAAVEIARQLRLRDLGGLIICDFIDMA
VSKHRREVEKVFRAAMKNDHAKLRILKMSAFGLIEITRQRMRSSIGRSTYYKCPYCKGTG
NIKNDDMLGLELIRLLQLAGAKKETYRIEMLVSPGVADFLQNFKRTDISRIEQLCDKRII
VRSDENIVGENYIINCYDNRDRHLNMDF
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgtcaagagatgtactcgtcaatgtatcgcagccggaagaatgccgggttgcggtcgta
gaagacggaatattagatgaactatatatcgaacgaacaaacctgcaaagctgcgtaaac
aatgtttacaaaggcaaaataaccggaatagaaccgagcatacaggcggcttttgttgaa
tttggcggccccaaagccggttttctccacatcagcgatgttcacccgaaatatttcaca
aaggattaccccgtagaaaaggtcggccagagactttcaatgagaaagcggccgcccatt
cagaaatgcctcaaacgaggccaggaaataatgattcaggtaacgcgggacggcatcgag
aagaaaggccctaccgttaccacgtacatatcaatgcccggaaggtatctggtgcttatg
ccctggctgcacggcgtgggaatttcacaaaaggtcgaagaaaacgaggaccgaaaacgg
ctcagagaaatatttgatgacgaagatcagtacagaaactgcggcctgattgtccggact
gccgcaaaagacgcttcaaaacgcgcgctccagagcgatttgcgatatgtcatgcgtctg
tggggttcgatacagaaaaagtttaagcggagcaaagctcccacagaaatatatcaggat
tcaaatctggctatacgcacactgcgggatatctttaacacaaagctgacgaaaattgtc
tgcgactctgaagaaatgggcagaaaactcatggaatttgtcgctatcagccagccaaga
atgaagaagattgtcagcatttataatgacaaggtacccctattccaccattacaatatc
gaagaccagataaaaacaatacactccaacagggttgagctgccaagcggcgcctcgatt
gttatcgatcagacagaggccctcgtcgcaattgatgtaaacaccggcaaaggctcgcgg
cacaatgatgccgagacaaacatatacaagacaaacctcgaagctgccgtcgagattgcc
agacagctgcggctccgcgaccttggaggactgataatatgcgactttatcgatatggcg
gtaagcaaacaccgccgcgaagtcgaaaaggttttcagggcggcgatgaaaaacgatcat
gccaaactgagaatcctcaaaatgagcgcgttcgggcttatcgagattacccgtcagcgg
atgcggtcttcaataggacgctcaacctattacaaatgcccatactgcaaaggaaccgga
aacataaagaacgatgacatgctcggactcgagctgatccggctgcttcagcttgcggga
gcgaaaaaagaaacatacagaatcgaaatgcttgtctcgcccggtgtcgcggactttctc
caaaactttaaacgtacagacatttcacgcattgagcagctatgcgataagaggattatc
gtacgaagcgatgagaacattgtgggagaaaactatataatcaactgttacgacaaccgt
gacagacacttgaacatggatttttga

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