Limihaloglobus sulfuriphilus: SMSP2_02300
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Entry
SMSP2_02300 CDS
T04749
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pbas
Limihaloglobus sulfuriphilus
Pathway
pbas03420
Nucleotide excision repair
pbas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SMSP2_02300 (pcrA)
03430 Mismatch repair
SMSP2_02300 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbas03400
]
SMSP2_02300 (pcrA)
Enzymes [BR:
pbas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SMSP2_02300 (pcrA)
DNA repair and recombination proteins [BR:
pbas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SMSP2_02300 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SMSP2_02300 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
AAA_14
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
AQQ71921
UniProt:
A0A1Q2MGV9
LinkDB
All DBs
Position
complement(2952166..2954409)
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AA seq
747 aa
AA seq
DB search
MIETHSRTFDPSLLTPSQSEAVNFRDGALLVLAGPGSGKTRVIACRIVRLIETGAAPWHI
CAITFTNKAAEEMRKRVAGMGVGPGTQISTFHSLCVRILRRYGDAANVKENFSIYSDDEQ
RKCVKQAVSNLDYPSGSFPPAKTLAAISRFKNAVETPESLTEFEGDYYYSKIIKIYKEYQ
RLLDENNALDFDDLLMKTALLLKNSDHVREELSGRYRYLLIDEYQDTNHAQYQIARLLAK
KHGNIFVVGDPDQSIYKWRGADIKNILQFEKDWPNASRIDLQENFRSRREILELADRLIV
NNKQRKPKKLVAAVSGEAEVVFDRYEDSRLESSSIASDIKKLITSGADPNEIAILYRVNS
MSRTLEESLVREKIPYRIVRGVEFYSRKEIRDMIAYLKLIVNPDDGQAFARIVNTPTRGI
GKTTVNRIIEFAQSGRISIFDAASRVSSISTIGPGPSGKVRTFVEMMRKFQKAAAETNSV
ADIMELVYDESGIEKSLEADPEGGNASDNIDELINSASLYDENAEEPTLLDYLQSIALYS
DSDAYDPESGCVSLMTLHAAKGLEFDNVYIIGLEQGMLPHERSMESEDDLEEERRLFFMG
ITRARHRLHISHTDYRMLRGIQSRTIPSSFLGEIGADTGRSGSSESVSFRFMSPPTGRNS
SARGQSYGYSKPQTAKKSPVKKYTSDLSAVPQKDTPFKKGDKVLHPKFGFGVVTDFMDSG
ENSIVSVRFNTGSSKNLLLKYAKLTKK
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaactcacagccgtacgtttgacccgagtctgttaaccccctctcagtcagaa
gccgtgaatttcagggatggcgctctgctagtccttgccggcccgggcagcggcaagaca
cgggtaattgcctgccgcatagtccgacttattgaaaccggcgcggctccctggcatata
tgcgcgattacgtttaccaacaaggccgccgaggaaatgcgaaagagggtcgccggcatg
ggtgtgggcccgggaacgcagataagcacgtttcactcgctttgtgttcggattctccgc
aggtacggagacgccgcaaatgtgaaggagaatttcagcatctattccgacgatgagcag
cgcaagtgcgtcaagcaggctgtttcaaaccttgattacccttcgggcagttttcctccg
gcaaagacgcttgccgcgatttcgagattcaagaacgccgtcgagacgcccgagagcctt
accgagtttgagggtgattattactacagcaaaataatcaagatatacaaggagtaccag
cggcttcttgatgaaaataacgcgctggatttcgacgacctgctgatgaagacggccttg
ctgctcaaaaacagtgaccatgtccgcgaggagctctcgggccggtaccgctatctgctg
atcgatgagtaccaggacacgaaccatgcccagtaccagatagcccgcctgctggcaaaa
aagcacggtaatatttttgtcgtcggcgaccctgaccagtcgatctacaaatggcgcggg
gcggatatcaagaatattctccagtttgaaaaggactggcccaatgcttcacgcattgac
ctgcaggagaacttccgcagccgaagagagatacttgagcttgccgacaggctcattgta
aacaacaaacagcgaaagccaaaaaaacttgtcgcggcggtctccggcgaggcggaggtg
gttttcgacaggtacgaggactcccgcctcgagagcagcagtatcgcctctgacataaaa
aaacttatcacaagcggggcggatcccaacgagattgcgatactctaccgcgtaaactcc
atgagccgaacacttgaagagtcgctcgtccgtgaaaaaatcccttaccgtatagtccgc
ggcgtggagttctacagccgcaaagaaatacgcgacatgatcgcctatctcaagctcata
gtaaaccccgacgacggccaggcttttgcccgcattgtcaacactccaacccgcggcatc
ggcaagaccacagtcaacaggataattgaatttgcccagagcggcaggataagtattttt
gacgcggcttcaagggtatcttccataagcacaatcgggcccgggccttcgggcaaggtt
cgcacatttgtggagatgatgcgcaagttccagaaagccgccgcggagacaaacagtgtt
gccgatatcatggagctggtgtacgatgaatcggggatagaaaaatcgcttgaggccgac
cccgaaggcggcaatgcctctgataatattgatgagcttataaactcggcttctctgtat
gatgaaaacgccgaggagccaacgctgcttgactatctccagtcgatagcattatacagc
gacagcgatgcgtatgatcctgagagcgggtgtgtttcgctgatgacactccatgccgca
aaggggctggagtttgacaatgtgtatattatcggtcttgaacaggggatgctgccgcac
gagcggagcatggaaagtgaagacgacctcgaagaagaacgcaggctctttttcatgggc
attacccgcgcccggcacaggctgcacataagccataccgattacaggatgctgcggggc
attcagagccgaactattccctcctcattcctgggcgagataggagccgataccggcaga
agcggatcttccgagtcggtaagtttcaggtttatgagtccgccgacgggcagaaattcc
tccgccagagggcaaagttacggttattctaaaccgcagaccgcaaaaaagagcccggtc
aagaaatatacttcggatttgagcgcggtgccgcaaaaggatacaccctttaaaaaaggc
gacaaggtgcttcacccgaaattcggcttcggtgtggttacggatttcatggattcggga
gaaaacagcattgtttcagtgcgttttaataccggatcgagcaaaaatctgctgttgaaa
tatgctaaactaacgaaaaagtaa
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