Limihaloglobus sulfuriphilus: SMSP2_02772
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Entry
SMSP2_02772 CDS
T04749
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pbas
Limihaloglobus sulfuriphilus
Brite
KEGG Orthology (KO) [BR:
pbas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbas03016
]
SMSP2_02772 (rnd)
Enzymes [BR:
pbas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SMSP2_02772 (rnd)
Transfer RNA biogenesis [BR:
pbas03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SMSP2_02772 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
NikA-like
DNA_pol_A_exoN
RHH_1
DUF7267
Motif
Other DBs
NCBI-ProteinID:
AQQ72389
UniProt:
A0A1Q2MIA5
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All DBs
Position
3555168..3556316
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AA seq
382 aa
AA seq
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MTVAYLYVDNDKTLQTAIEHIKLAERVAVDIEADSLHNYNEKVCLIQITTNGENFIIDPF
AKMDLRKLLNLLKKKPLIFHGGDYDLRMLYHTYQFKPEAPVFDTKIAAQFMGMDQLGLAT
VIKELYNIKIDKAHQTSDWSKRPLSPTQLQYACLDTHFLHEIAEHYESKLKRKKRFDWYV
ETCERIAIAAIENHDNNGHKDPWRIKGYSKLHPGQLRYLKEVWQWREETAQKRDIPPFKV
MRNEVMLLISKWAFHNPFRSVKRFRNLPKKLTDEEISSLRETIRKGKDVPKDQWPSQYRK
VEKHRRSPSNKAIVAELKEKIEKKAKKMGLSTSTLITSRCIDKISRCCPVNEQELRENTN
MYEWQISLMSKTIFSVVKKNTR
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgtcgcttatttgtatgttgacaacgataagacgcttcaaaccgcgatagaacat
attaagctggctgagcgtgtagcagtagatatagaagcagacagtctccacaactacaac
gaaaaggtgtgcctgattcagattacaacaaatggtgagaatttcatcatagaccctttt
gctaagatggatctgcgaaaactgctcaacctgctcaaaaagaagcccctgatttttcac
ggcggagactatgacctgcgaatgttatatcacacgtatcagttcaagcccgaggctcca
gtctttgataccaaaatcgccgcgcagtttatgggaatggatcagctgggccttgctaca
gtcataaaagagctttacaatataaaaattgacaaagcccaccagacttcagactggtca
aagaggcctttgagcccaacacagcttcagtacgcctgtcttgacactcattttctccat
gaaattgctgagcattacgagagtaagctcaaaagaaaaaaacgttttgactggtatgtt
gaaacctgtgagagaattgcaatagctgcaattgaaaatcacgataacaacggtcataaa
gatccctggcgtataaaagggtattctaagctgcatccgggccaattaaggtacctcaag
gaggtatggcaatggcgggaagaaacagctcagaaacgtgacattcctccattcaaagtt
atgcgtaacgaggttatgcttttaatttcaaagtgggcgtttcacaatccgttccgaagc
gttaaaagattccggaatctgcctaaaaaactaactgatgaggaaatcagctctctgcgt
gaaactatacgaaaaggtaaggacgttcccaaagatcagtggcccagccagtacagaaaa
gtagaaaaacatcgccgcagccccagcaataaagcaattgttgccgagttgaaagaaaaa
atagaaaaaaaagcaaagaaaatggggttaagtacttcaacactcataacttcgagatgt
attgacaagatttcgaggtgctgccctgttaatgaacaggaattgcgtgagaatacgaat
atgtatgaatggcagatatcgctgatgtcaaagaccatattcagcgttgtgaaaaaaaat
accaggtaa
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